RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 NDUFA7O95182 113 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 HLA-DRB4P13762 266 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 C9orf85Q96MD7 179 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 TSSC4Q9Y5U2 329 aaPredicted RBP8.52□□□□□ -1.05
RAB5C-208ENST00000551338 HLA-DRB4X5D2U9 266 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 CSMD2Q7Z408 3487 aa8.52□□□□□ -1.05
RAB5C-208ENST00000551338 IGHV1OR15-1A0A075B7D0 117 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 IGHV3-16A0A0C4DH30 117 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 CCL24O00175 119 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 HBDP02042 147 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 CD7P09564 240 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 RBMY1A1P0DJD3 496 aaKnown RBP8.51□□□□□ -1.05
RAB5C-208ENST00000551338 RBMY1CP0DJD4 496 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 FXYD7P58549 80 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 RBMY1FQ15415 496 aaKnown RBP8.51□□□□□ -1.05
RAB5C-208ENST00000551338 ZNF124Q15973 351 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 CD300EQ496F6 205 aaPredicted RBP8.51□□□□□ -1.05
RAB5C-208ENST00000551338 DEFB125Q8N687 156 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
RAB5C-208ENST00000551338 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
RAB5C-208ENST00000551338 TRAV25A0A0B4J276 109 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 C20orf202A1L168 122 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 OR4C46A6NHA9 309 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 ADARB2-AS1A8MUL3 147 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 H3BMM0 161 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
RAB5C-208ENST00000551338 POM121L12Q8N7R1 296 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 Q8N8P6 123 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
RAB5C-208ENST00000551338 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
RAB5C-208ENST00000551338 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 TRAV9-2A0A087WT02 112 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 MGPP08493 103 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 PROK1P58294 105 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 LINC00315P59091 139 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 RASL10AQ92737 203 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 MIEN1Q9BRT3 115 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 ZNF256Q9Y2P7 627 aaPredicted RBP8.49□□□□□ -1.05
RAB5C-208ENST00000551338 SORL1Q92673 2214 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 NACAE9PAV3 2078 aa8.49□□□□□ -1.05
RAB5C-208ENST00000551338 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 TEX15Q9BXT5 2789 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 IGLC3P0DOY3 106 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 FCER1GP30273 86 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
RAB5C-208ENST00000551338 Q8N1Y9 231 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 JMJD8Q96S16 334 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 MCRIP2Q9BUT9 160 aaKnown RBP8.48□□□□□ -1.05
RAB5C-208ENST00000551338 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 JPT2Q9H910 190 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 MDFICQ9P1T7 246 aa8.48□□□□□ -1.05
RAB5C-208ENST00000551338 SONP18583 2426 aaKnown RBP8.48□□□□□ -1.05
RAB5C-208ENST00000551338 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
RAB5C-208ENST00000551338 H0Y8G0 127 aa8.47□□□□□ -1.05
RAB5C-208ENST00000551338 EREGO14944 169 aa8.47□□□□□ -1.05
RAB5C-208ENST00000551338 IGLL1P15814 213 aa8.47□□□□□ -1.05
RAB5C-208ENST00000551338 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
RAB5C-208ENST00000551338 FLNAP21333 2647 aaKnown RBP8.47□□□□□ -1.05
RAB5C-208ENST00000551338 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
RAB5C-208ENST00000551338 KRTAP10-3P60369 221 aa8.46□□□□□ -1.06
RAB5C-208ENST00000551338 TMEM158Q8WZ71 300 aa8.46□□□□□ -1.06
RAB5C-208ENST00000551338 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.06
RAB5C-208ENST00000551338 PMCHL2Q9BQD1 86 aa8.46□□□□□ -1.06
RAB5C-208ENST00000551338 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
RAB5C-208ENST00000551338 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 LGALS9CQ6DKI2 356 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 CHD6Q8TD26 2715 aa8.45□□□□□ -1.06
RAB5C-208ENST00000551338 TLN2Q9Y4G6 2542 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 TCAPO15273 167 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 SMIM17P0DL12 118 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 LAGE3Q14657 143 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 SNHG12Q9BXW3 62 aa8.44□□□□□ -1.06
RAB5C-208ENST00000551338 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
RAB5C-208ENST00000551338 CCDC168Q8NDH2 2452 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 A0A087WWL8 130 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 CBY3A6NI87 242 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 NSUN5P1Q3KNT7 163 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
RAB5C-208ENST00000551338 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
RAB5C-208ENST00000551338 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms