RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 UBE2D2P62837 147 aa7.97□□□□□ -1.13
SNRPF-203ENST00000551316 HIGD2BQ4VC39 106 aa7.97□□□□□ -1.13
SNRPF-203ENST00000551316 ATP5SQ99766 215 aa7.97□□□□□ -1.13
SNRPF-203ENST00000551316 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 RAB5CP51148 216 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 RBX1P62877 108 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 ID3Q02535 119 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 SUN5Q8TC36 379 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 FXYD5Q96DB9 178 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.14
SNRPF-203ENST00000551316 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 PTTG1O95997 202 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 IFNA7P01567 189 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 NEDD8Q15843 81 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 MIR17HGQ75NE6 70 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 CLVS1Q8IUQ0 354 aaPredicted RBP7.95□□□□□ -1.14
SNRPF-203ENST00000551316 OR1L4Q8NGR5 311 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 PTH2Q96A98 100 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 BCL7BQ9BQE9 202 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 SLC39A9Q9NUM3 307 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
SNRPF-203ENST00000551316 H0Y9J4 135 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 MBPP02686 304 aaPredicted RBP7.94□□□□□ -1.14
SNRPF-203ENST00000551316 ANXA3P12429 323 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 RPS10P46783 165 aaKnown RBP7.94□□□□□ -1.14
SNRPF-203ENST00000551316 C1orf137Q5JT78 98 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 Q6ZRG5 221 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 KCNS1Q96KK3 526 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 PFDN5Q99471 154 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
SNRPF-203ENST00000551316 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 AKAIN1P0CW23 69 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 NTM-AS1Q6ZSK4 140 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 DIRAS2Q96HU8 199 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 PRRT1Q99946 306 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 CHCHD5Q9BSY4 110 aa7.93□□□□□ -1.14
SNRPF-203ENST00000551316 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 A8MWV9 139 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 NCS1P62166 190 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 MT1HP80294 61 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 REG3AQ06141 175 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 GAGE6Q13070 117 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 LGALSLQ3ZCW2 172 aaPredicted RBP7.92□□□□□ -1.14
SNRPF-203ENST00000551316 FAM74A4Q5TZK3 123 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 FER1L6-AS1Q8NA97 138 aa7.92□□□□□ -1.14
SNRPF-203ENST00000551316 MT-ND6P03923 174 aa7.91□□□□□ -1.14
SNRPF-203ENST00000551316 VAMP1P23763 118 aa7.91□□□□□ -1.14
SNRPF-203ENST00000551316 RANP62826 216 aaKnown RBP7.91□□□□□ -1.14
SNRPF-203ENST00000551316 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
SNRPF-203ENST00000551316 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
SNRPF-203ENST00000551316 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
SNRPF-203ENST00000551316 IGLV7-43P04211 117 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 PPP1R1AQ13522 171 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 PRR27Q6MZM9 219 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 C20orf203Q8NBC4 194 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 TRIM63Q969Q1 353 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 SGK494Q96LW2 274 aa7.9□□□□□ -1.14
SNRPF-203ENST00000551316 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.15
SNRPF-203ENST00000551316 C12orf45Q8N5I9 185 aaPredicted RBP7.89□□□□□ -1.15
SNRPF-203ENST00000551316 SMIM4Q8WVI0 70 aa7.89□□□□□ -1.15
SNRPF-203ENST00000551316 TMED6Q8WW62 240 aa7.89□□□□□ -1.15
SNRPF-203ENST00000551316 MIXL1Q9H2W2 232 aa7.89□□□□□ -1.15
SNRPF-203ENST00000551316 TREM1Q9NP99 234 aa7.89□□□□□ -1.15
SNRPF-203ENST00000551316 UBE2L5PA0A1B0GUS4 154 aa7.88□□□□□ -1.15
SNRPF-203ENST00000551316 CRYGAP11844 174 aa7.88□□□□□ -1.15
SNRPF-203ENST00000551316 RPL29P47914 159 aaKnown RBP7.88□□□□□ -1.15
SNRPF-203ENST00000551316 UBE2D1P51668 147 aa7.88□□□□□ -1.15
SNRPF-203ENST00000551316 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
SNRPF-203ENST00000551316 CYCSP99999 105 aaKnown RBP7.88□□□□□ -1.15
SNRPF-203ENST00000551316 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
SNRPF-203ENST00000551316 LINC00526Q96FQ7 95 aa7.88□□□□□ -1.15
SNRPF-203ENST00000551316 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
SNRPF-203ENST00000551316 TRBV7-3A0A075B6L6 115 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 ANKRD20A5PA0PJZ0 165 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 TSC22D2O75157 780 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.157e-7■■■■■ 45
SNRPF-203ENST00000551316 SCGB1D2O95969 90 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 CSN1S1P47710 185 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 GOLT1AQ6ZVE7 132 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 GGACTQ9BVM4 153 aa7.87□□□□□ -1.15
SNRPF-203ENST00000551316 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 C7orf66A4D0T2 115 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 SFT2D2O95562 160 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 GNG5P63218 68 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
SNRPF-203ENST00000551316 SSBP1Q04837 148 aaKnown RBP7.86□□□□□ -1.15
SNRPF-203ENST00000551316 TMEM128Q5BJH2 165 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 NEXN-AS1Q8NBZ9 246 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
SNRPF-203ENST00000551316 MCUBQ9NWR8 336 aa7.86□□□□□ -1.15
SNRPF-203ENST00000551316 IGKV3D-20A0A0C4DH25 116 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms