RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ASB13Q8WXK3 278 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 TREM1Q9NP99 234 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 RPH3ALQ9UNE2 315 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 SERTM2A0A1B0GWG4 89 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 TRBV6-4A0A1B0GX49 114 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 F6UZH7 168 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 RPL12P30050 165 aaKnown RBP5.1□□□□□ -1.59
NEK3-201ENST00000550331 ODF1Q14990 250 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 RHOHQ15669 191 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 ACOT6Q3I5F7 207 aaPredicted RBP5.1□□□□□ -1.59
NEK3-201ENST00000550331 ZNF876PQ49A33 203 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 Q6ZSN1 163 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 GOLT1AQ6ZVE7 132 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 Q8N814 137 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 SLC25A29Q8N8R3 303 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 CLRN3Q8NCR9 226 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 TVP23CQ96ET8 276 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 PRADC1Q9BSG0 188 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 MARVELD1Q9BSK0 173 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 NDFIP1Q9BT67 221 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 SMIM3Q9BZL3 60 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
NEK3-201ENST00000550331 TRAV8-1A0A0A6YYK1 113 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 RS1O15537 224 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 EIF3GO75821 320 aaKnown RBP eCLIP5.09□□□□□ -1.59
NEK3-201ENST00000550331 C1QBP02746 253 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 TCRAP04437 139 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 MGST1P10620 155 aaKnown RBP5.09□□□□□ -1.59
NEK3-201ENST00000550331 GNG5P63218 68 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 LAGE3Q14657 143 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 OR10J3Q5JRS4 329 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 LELP1Q5T871 98 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 CFAP126Q5VTH2 177 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 C5orf17Q8NAS9 161 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 PTH2Q96A98 100 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 C9orf85Q96MD7 179 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 WFDC1Q9HC57 220 aa5.09□□□□□ -1.59
NEK3-201ENST00000550331 K7EQM0 130 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 TAAR5O14804 337 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 SSNA1O43805 119 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 ARL14EPLP0DKL9 152 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 RAB2AP61019 212 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 HAMPP81172 84 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 IFITM3Q01628 133 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 OR10G9Q8NGN4 311 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 OR10G7Q8NGN6 311 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 TM2D2Q9BX73 214 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 SH3BGRL3Q9H299 93 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 Q9HAA7 133 aa5.08□□□□□ -1.6
NEK3-201ENST00000550331 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
NEK3-201ENST00000550331 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 GCGP01275 180 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 IGHV3-30P01768 117 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 IGHV3-33P01772 117 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 STAG3L2P0CL84 134 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 STAG3L3P0CL85 134 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 IGHV3-30-3P0DP02 117 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 IGHV3-30-5P0DP03 117 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 RNASE3P12724 160 aaKnown RBP5.07□□□□□ -1.6
NEK3-201ENST00000550331 CDC34P49427 236 aaPredicted RBP5.07□□□□□ -1.6
NEK3-201ENST00000550331 ZNF80P51504 273 aaPredicted RBP5.07□□□□□ -1.6
NEK3-201ENST00000550331 ZFP69Q49AA0 526 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 SMUG1Q53HV7 270 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 ZNF506Q5JVG8 444 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 DPPA3Q6W0C5 159 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 OR2G3Q8NGZ4 309 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 ATP6V0E2Q8NHE4 81 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 SUN5Q8TC36 379 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 PSMG3Q9BT73 122 aaPredicted RBP5.07□□□□□ -1.6
NEK3-201ENST00000550331 GTSF1LQ9H1H1 148 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 PSG8Q9UQ74 426 aa5.07□□□□□ -1.6
NEK3-201ENST00000550331 TRAV8-3A0A0A6YYJ7 113 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 PGPEP1LA6NFU8 196 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 A8MWV9 139 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 HMGB3O15347 200 aaKnown RBP5.06□□□□□ -1.6
NEK3-201ENST00000550331 IGLV2-11P01706 119 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 GCHFRP30047 84 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 DEFA1P59665 94 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 DEFA3P59666 94 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 FLI1Q01543 452 aaPredicted RBP5.06□□□□□ -1.6
NEK3-201ENST00000550331 SAPCD1Q5SSQ6 148 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 ZFP2Q6ZN57 461 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 CYB561D1Q8N8Q1 229 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 TMEM75Q8N9X5 138 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 SGK494Q96LW2 274 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 PARLQ9H300 379 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 TMEM167BQ9NRX6 74 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 EPDR1Q9UM22 224 aa5.06□□□□□ -1.6
NEK3-201ENST00000550331 KRTAP29-1A8MX34 341 aaPredicted RBP5.05□□□□□ -1.6
NEK3-201ENST00000550331 GGTLC3B5MD39 225 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 CXorf1O96002 111 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 MBP02144 154 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 LINC00694P0DN24 101 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 SERF2P84101 59 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 TOR2AQ5JU69 321 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 CFAP161Q6P656 301 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms