RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
VDR-208ENST00000550325 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 IFITM1P13164 125 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
VDR-208ENST00000550325 VCX2Q9H322 139 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 CFC1P0CG37 223 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
VDR-208ENST00000550325 DEFB1P60022 68 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 FAM159AQ6UWV7 190 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 LY6HO94772 140 aa9.3□□□□□ -0.92
VDR-208ENST00000550325 IGF1P05019 195 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 UBE2D1P51668 147 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 C8orf31Q8N9H6 132 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 TRAV12-1A0A0B4J245 112 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 CTSGP08311 255 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 CLEC19AQ6UXS0 136 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 LAMA5O15230 3695 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 THBDP07204 575 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 PRSS2P07478 247 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 UBE2D3P61077 147 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 UBE2D2P62837 147 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 C10orf126Q8N4M7 172 aa9.29□□□□□ -0.92
VDR-208ENST00000550325 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 TP53TG1Q9Y2A0 90 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 FASNP49327 2511 aaKnown RBP9.28□□□□□ -0.92
VDR-208ENST00000550325 TEX49A0A1B0GTD5 131 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
VDR-208ENST00000550325 C15orf53Q8NAA6 179 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 A4D1N5 150 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 CD7P09564 240 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 C15orf32Q32M92 178 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 DPM3Q9P2X0 92 aa9.28□□□□□ -0.92
VDR-208ENST00000550325 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.92
VDR-208ENST00000550325 A0A0J9YY99 117 aa9.27□□□□□ -0.92
VDR-208ENST00000550325 NPC2P61916 151 aa9.27□□□□□ -0.92
VDR-208ENST00000550325 SLC50A1Q9BRV3 221 aa9.27□□□□□ -0.92
VDR-208ENST00000550325 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.92
VDR-208ENST00000550325 ZNF883P0CG24 379 aa9.27□□□□□ -0.93
VDR-208ENST00000550325 NUP37Q8NFH4 326 aa9.27□□□□□ -0.93
VDR-208ENST00000550325 NHLRC4P0CG21 123 aaPredicted RBP9.27□□□□□ -0.93
VDR-208ENST00000550325 RPL32P62910 135 aaKnown RBP9.27□□□□□ -0.93
VDR-208ENST00000550325 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
VDR-208ENST00000550325 F8W735 103 aaPredicted RBP9.26□□□□□ -0.93
VDR-208ENST00000550325 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
VDR-208ENST00000550325 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
VDR-208ENST00000550325 Q8N1Y9 231 aa9.26□□□□□ -0.93
VDR-208ENST00000550325 ZNF256Q9Y2P7 627 aaPredicted RBP9.26□□□□□ -0.93
VDR-208ENST00000550325 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
VDR-208ENST00000550325 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
VDR-208ENST00000550325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
VDR-208ENST00000550325 RHODO00212 210 aa9.25□□□□□ -0.93
VDR-208ENST00000550325 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
VDR-208ENST00000550325 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
VDR-208ENST00000550325 ZNF56Q15929 161 aa9.25□□□□□ -0.93
VDR-208ENST00000550325 TMEM190Q8WZ59 177 aa9.25□□□□□ -0.93
VDR-208ENST00000550325 A0A087WWL8 130 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 Q6ZS92 163 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 GNRH2O43555 120 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 ASIPP42127 132 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 PRR9Q5T870 116 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
VDR-208ENST00000550325 ZNF292O60281 2723 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 J3QQQ9 107 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
VDR-208ENST00000550325 E7EQL1 145 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 LINC01619G3V211 115 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 BUB3O43684 328 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 METTL26Q96S19 204 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 C2orf82Q6UX34 121 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 CITED1Q99966 193 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 KAAG1Q9UBP8 84 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 BSNQ9UPA5 3926 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 CHCHD5Q9BSY4 110 aa9.23□□□□□ -0.93
VDR-208ENST00000550325 A0A0G2JNJ9 132 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 ELANEP08246 267 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
VDR-208ENST00000550325 JPT2Q9H910 190 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 Q9UFV3 132 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 COX6B1P14854 86 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 PMVKQ15126 192 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 RNF5Q99942 180 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 F6UB75 175 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
VDR-208ENST00000550325 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms