RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 SPINK13Q1W4C9 94 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 C20orf78Q9BR46 151 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 TIMM21Q9BVV7 248 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 KLK9Q9UKQ9 250 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 USMG5Q96IX5 58 aa7.92□□□□□ -1.14
SMARCC2-209ENST00000550164 J3QQQ9 107 aa7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 TCF15Q12870 199 aa7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 TRGV11A0A075B6L2 103 aa7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 RNASE1P07998 156 aaKnown RBP7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 Q71RC1 249 aaPredicted RBP7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
SMARCC2-209ENST00000550164 RBAKDNA6NC62 111 aa7.9□□□□□ -1.14
SMARCC2-209ENST00000550164 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
SMARCC2-209ENST00000550164 TRANK1O15050 2925 aa7.9□□□□□ -1.14
SMARCC2-209ENST00000550164 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
SMARCC2-209ENST00000550164 PHLDA1Q8WV24 401 aaPredicted RBP7.9□□□□□ -1.14
SMARCC2-209ENST00000550164 NCOR2Q9Y618 2525 aa7.9□□□□□ -1.15
SMARCC2-209ENST00000550164 Q8N9W7 124 aa7.9□□□□□ -1.15
SMARCC2-209ENST00000550164 TMEM141Q96I45 108 aa7.9□□□□□ -1.15
SMARCC2-209ENST00000550164 HOXB4P17483 251 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 YAE1D1Q9NRH1 226 aa7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 SLC25A20O43772 301 aa7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 IGLC6P0CF74 106 aa7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 SYNJ2BPP57105 145 aa7.89□□□□□ -1.15
SMARCC2-209ENST00000550164 NDUFA4O00483 81 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 CRYGBP07316 175 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 LY6G5BQ8NDX9 201 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 TRBV7-9A0A0J9YWB2 115 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 TRPT1Q86TN4 253 aaKnown RBP7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 PTH2Q96A98 100 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 XIRP2A4UGR9 3374 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 ANKRD11Q6UB99 2663 aaPredicted RBP7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 RPL39P62891 51 aaKnown RBP7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
SMARCC2-209ENST00000550164 K7ENP7 123 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 NTN5Q8WTR8 489 aaPredicted RBP7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 NOTCH2Q04721 2471 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 CENPVL3A0A0U1RRI6 287 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 DNAH14Q0VDD8 3507 aa7.87□□□□□ -1.15
SMARCC2-209ENST00000550164 SETD2Q9BYW2 2564 aaPredicted RBP7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV1-69DA0A0B4J2H0 117 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV1-69P01742 117 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 LENEPQ9Y5L5 61 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 A0A1W2PRX2 142 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
SMARCC2-209ENST00000550164 TRGV2A0A075B6R0 118 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 I3L3M4 83 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV3-53P01767 116 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 NDUFA12Q9UI09 145 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV3-16A0A0C4DH30 117 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 C11orf86A6NJI1 115 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 E9PLD3 99 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 H3BMM0 161 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 CFC1P0CG37 223 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 ZFP36P26651 326 aaKnown RBP7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 DEFB131AP59861 70 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 FOXI1Q12951 378 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 TLN2Q9Y4G6 2542 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV3-38A0A0C4DH36 116 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 A4D1N5 150 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
SMARCC2-209ENST00000550164 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 IGHV7-4-1A0A0J9YVY3 117 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 CCDC168Q8NDH2 2452 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 SUMO4Q6EEV6 95 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 MORN3Q6PF18 240 aaPredicted RBP7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 TM2D2Q9BX73 214 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 JPT2Q9H910 190 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 U3KQK5 164 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 USP9YO00507 2555 aaPredicted RBP7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 PRIMA1Q86XR5 153 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 TOMM6Q96B49 74 aa7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 ZNF48Q96MX3 618 aaPredicted RBP7.84□□□□□ -1.15
SMARCC2-209ENST00000550164 A0A0J9YXV3 536 aa7.84□□□□□ -1.16
SMARCC2-209ENST00000550164 IGF1P05019 195 aa7.84□□□□□ -1.16
SMARCC2-209ENST00000550164 C16orf54Q6UWD8 224 aa7.84□□□□□ -1.16
SMARCC2-209ENST00000550164 TEN1Q86WV5 123 aa7.84□□□□□ -1.16
SMARCC2-209ENST00000550164 GATD1Q8NB37 220 aa7.84□□□□□ -1.16
SMARCC2-209ENST00000550164 AGRNO00468 2067 aa7.83□□□□□ -1.16
SMARCC2-209ENST00000550164 TRGV1A0A0A0MS02 117 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms