RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 H3BNG1 76 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 H3BVH4 76 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 PDE6DO43924 150 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 LTAP01374 205 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 BCL2P10415 239 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 SRIP30626 198 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 RPL35P42766 123 aaKnown RBP5.09□□□□□ -1.59
PTCH1-219ENST00000549678 MEF2BQ02080 365 aaPredicted RBP5.09□□□□□ -1.59
PTCH1-219ENST00000549678 SOHLH1Q5JUK2 328 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 DAZAP1Q96EP5 407 aaKnown RBP5.09□□□□□ -1.59
PTCH1-219ENST00000549678 ZNF479Q96JC4 524 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 VAX2Q9UIW0 290 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 PHLDA3Q9Y5J5 127 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 HSPG2P98160 4391 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 MUC4Q99102 2169 aa5.09□□□□□ -1.59
PTCH1-219ENST00000549678 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 IGHV3-73A0A0B4J1V6 119 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 IGKV3D-20A0A0C4DH25 116 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 GNG4P50150 75 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 CEBPGP53567 150 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 CRYBA4P53673 196 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 FAM3BP58499 235 aaPredicted RBP5.08□□□□□ -1.6
PTCH1-219ENST00000549678 CCL20P78556 96 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 FHL2Q14192 279 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 MRPL23Q16540 153 aaKnown RBP5.08□□□□□ -1.6
PTCH1-219ENST00000549678 CENPWQ5EE01 88 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 RASL10AQ92737 203 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 PRADC1Q9BSG0 188 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 C11orf21Q9P2W6 132 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 NACAE9PAV3 2078 aa5.08□□□□□ -1.6
PTCH1-219ENST00000549678 PGPEP1LA6NFU8 196 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 A8MWV9 139 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 KRBOX1C9JBD0 128 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 M0R381 172 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 CIDEAO60543 219 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 GYPEP15421 78 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 ZNF674Q2M3X9 581 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 ZNF506Q5JVG8 444 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 FAM74A4Q5TZK3 123 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 NEGR1Q7Z3B1 354 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 VSIG2Q96IQ7 327 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 C9orf85Q96MD7 179 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 EIF5A2Q9GZV4 153 aaKnown RBP5.07□□□□□ -1.6
PTCH1-219ENST00000549678 BIN3Q9NQY0 253 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 IL36BQ9NZH7 164 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 BOLA1Q9Y3E2 137 aa5.07□□□□□ -1.6
PTCH1-219ENST00000549678 XKRY2A2RUG3 117 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 RAB19A4D1S5 217 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 RNASE3P12724 160 aaKnown RBP5.06□□□□□ -1.6
PTCH1-219ENST00000549678 CRIP1P50238 77 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 SSTP61278 116 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 RPL19P84098 196 aaKnown RBP5.06□□□□□ -1.6
PTCH1-219ENST00000549678 RHOHQ15669 191 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 LINC01559Q495D7 138 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 TTC32Q5I0X7 151 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 TOR2AQ5JU69 321 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 ZFP82Q8N141 532 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 C11orf52Q96A22 123 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 DERL1Q9BUN8 251 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 TPPP3Q9BW30 176 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 LINC00588Q9Y4M8 146 aa5.06□□□□□ -1.6
PTCH1-219ENST00000549678 APOBP04114 4563 aaKnown RBP5.06□□□□□ -1.6
PTCH1-219ENST00000549678 RBFOX3A6NFN3 312 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 K7EQD1 137 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 RHODO00212 210 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 RS1O15537 224 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 P01737 135 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 SMIM17P0DL12 118 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 RPS20P60866 119 aaKnown RBP5.05□□□□□ -1.6
PTCH1-219ENST00000549678 ESRGQ1W209 222 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 SPANXN1Q5VSR9 72 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 CFAP126Q5VTH2 177 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 COX8CQ7Z4L0 72 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 SH2D6Q7Z4S9 175 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 OR2D3Q8NGH3 330 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 SMIM12Q96EX1 92 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 Q9H8V8 135 aa5.05□□□□□ -1.6
PTCH1-219ENST00000549678 MRPS16Q9Y3D3 137 aaKnown RBP5.05□□□□□ -1.6
PTCH1-219ENST00000549678 LOC100131303A0A0U1RQF7 123 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 NBDYA0A0U1RRE5 68 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 SIVA1O15304 175 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 NXPH4O95158 308 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 ZNF56Q15929 161 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 ZNRF2Q8NHG8 242 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 PTH2Q96A98 100 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 MLST8Q9BVC4 326 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 PARLQ9H300 379 aa5.04□□□□□ -1.6
PTCH1-219ENST00000549678 TRAV9-2A0A087WT02 112 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 A0A087WWL8 130 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 TRAV8-6A0A0B4J262 113 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 MUC21A0A0G2JKD1 596 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 MUC21A0A140T8X8 626 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 TRBV6-4A0A1B0GX49 114 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 GAGE12JA6NER3 117 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
PTCH1-219ENST00000549678 F5H697 171 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms