RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 A0A0D9SG52 128 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 MAP1LC3B2A6NCE7 125 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 FBLL1A6NHQ2 334 aaKnown RBP8.24□□□□□ -1.09
DDX54-206ENST00000549271 M0R2P5 195 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 GCGP01275 180 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 IFNA7P01567 189 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 SMUG1Q53HV7 270 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 MAP1LC3BQ9GZQ8 125 aa8.24□□□□□ -1.09
DDX54-206ENST00000549271 TRAV9-2A0A087WT02 112 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 PEX7O00628 323 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
DDX54-206ENST00000549271 PFN1P07737 140 aaKnown RBP8.23□□□□□ -1.09
DDX54-206ENST00000549271 SEC11BP0C7V7 166 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 SAPCD1Q5SSQ6 148 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 NKX6-2Q9C056 277 aaPredicted RBP8.23□□□□□ -1.09
DDX54-206ENST00000549271 TNFRSF18Q9Y5U5 241 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 ARL2-SNX15V9GYD0 113 aa8.23□□□□□ -1.09
DDX54-206ENST00000549271 TRGV4A0A0C4DH28 118 aa8.22□□□□□ -1.09
DDX54-206ENST00000549271 BCL2L11O43521 198 aa8.22□□□□□ -1.09
DDX54-206ENST00000549271 HIST1H2BAQ96A08 127 aa8.22□□□□□ -1.09
DDX54-206ENST00000549271 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
DDX54-206ENST00000549271 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
DDX54-206ENST00000549271 CRIP1P50238 77 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 DPPA3Q6W0C5 159 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 TMUB2Q71RG4 321 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 OR4C5Q8NGB2 326 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 ZNF471Q9BX82 626 aaPredicted RBP8.21□□□□□ -1.1
DDX54-206ENST00000549271 LY96Q9Y6Y9 160 aa8.21□□□□□ -1.1
DDX54-206ENST00000549271 KANTRA0A1W2PQU2 76 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 PGPEP1LA6NFU8 196 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 FABP5P3A8MUU1 101 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 C9JCJ5 164 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 K7EQD1 137 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 RS1O15537 224 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 ORM1P02763 201 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 GYPEP15421 78 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 PPT1P50897 306 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 ZNF876PQ49A33 203 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 Q86TA4 180 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 FAM213BQ8TBF2 198 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 PTH2Q96A98 100 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 LRP2P98164 4655 aa8.2□□□□□ -1.1
DDX54-206ENST00000549271 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 PAGE4O60829 102 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 OXTP01178 125 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
DDX54-206ENST00000549271 EVI2AP22794 236 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 SRIP30626 198 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 CST9LP1Q5W188 147 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 ZC2HC1AQ96GY0 325 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 ZFP30Q9Y2G7 519 aa8.19□□□□□ -1.1
DDX54-206ENST00000549271 A0A1B0GV50 99 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 TIRAPP58753 221 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 LGALSLQ3ZCW2 172 aaPredicted RBP8.18□□□□□ -1.1
DDX54-206ENST00000549271 ZNF506Q5JVG8 444 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 Q6ZNX1 250 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 FMC1Q96HJ9 113 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 TXNDC17Q9BRA2 123 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
DDX54-206ENST00000549271 KRBOX1C9JBD0 128 aa8.17□□□□□ -1.1
DDX54-206ENST00000549271 LTAP01374 205 aa8.17□□□□□ -1.1
DDX54-206ENST00000549271 EIF5AP63241 154 aaKnown RBP8.17□□□□□ -1.1
DDX54-206ENST00000549271 SH2D6Q7Z4S9 175 aa8.17□□□□□ -1.1
DDX54-206ENST00000549271 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
DDX54-206ENST00000549271 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
DDX54-206ENST00000549271 PCNPQ8WW12 178 aaKnown RBP8.17□□□□□ -1.1
DDX54-206ENST00000549271 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 B4DEV8 164 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 CIDEAO60543 219 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 SH2D1AO60880 128 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 PFDN1O60925 122 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 H2AFB1P0C5Y9 115 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
DDX54-206ENST00000549271 CCL20P78556 96 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 DNLZQ5SXM8 178 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 SLC25A29Q8N8R3 303 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
DDX54-206ENST00000549271 CRYGDP07320 174 aa8.15□□□□□ -1.1
DDX54-206ENST00000549271 UBE2G1P62253 170 aa8.15□□□□□ -1.1
DDX54-206ENST00000549271 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
DDX54-206ENST00000549271 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms