RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 LYZL1Q6UWQ5 148 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 FER1L6-AS1Q8NA97 138 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 CSNK1G2-AS1Q8NCQ2 148 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 BTF3L4Q96K17 158 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 FAM210BQ96KR6 192 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 C20orf144Q9BQM9 153 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 TGP01266 2768 aa5.88□□□□□ -1.47
DEPDC4-207ENST00000549249 NACAE9PAV3 2078 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 IGHV3-16A0A0C4DH30 117 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 H3BVH4 76 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 SPRY2O43597 315 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 IGHV4-30-4P0DP06 118 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 NUTF2P61970 127 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 FAM159AQ6UWV7 190 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 LINC00467Q9BRT7 94 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 TPPP3Q9BW30 176 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 CNFNQ9BYD5 112 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 SCRT2Q9NQ03 307 aa5.87□□□□□ -1.47
DEPDC4-207ENST00000549249 LOC102724200A0A096LPH7 203 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 OR5AL1P0C617 328 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 MED14OSP0DP75 135 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 ASIPP42127 132 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 KPRPQ5T749 579 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 ZNF705AQ6ZN79 300 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 TMEM136Q6ZRR5 245 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 KCNS1Q96KK3 526 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 C9orf85Q96MD7 179 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 CSTL1Q9H114 145 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 MSRB1Q9NZV6 116 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 MDFICQ9P1T7 246 aa5.86□□□□□ -1.47
DEPDC4-207ENST00000549249 IGHV3OR16-12A0A075B7B8 117 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 KIR2DL5BA0A0G2JN68 375 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 KIR2DL5BA0A0G2JPC4 375 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 CBY3A6NI87 242 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 PHOX2AO14813 284 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 PRB2P02812 416 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 AZU1P20160 251 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 S100A4P26447 101 aaKnown RBP5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 RPS10P46783 165 aaKnown RBP5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 HBBP68871 147 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 KIR2DL5AQ8N109 375 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 TMEM256Q8N2U0 113 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 C11orf72Q8NBR9 251 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 KIR2DL5BQ8NHK3 375 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 IL17DQ8TAD2 202 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 LINC01587Q99440 93 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 C1QTNF4Q9BXJ3 329 aa5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 TIMM8BQ9Y5J9 83 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-207ENST00000549249 TRGV11A0A075B6L2 103 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 IGHV4-4A0A075B6R2 117 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 A8MZ25 164 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 SNURFLB1AK76 121 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 F2Z2F3 143 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 NXPH4O95158 308 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 HTN1P15515 57 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 NTF3P20783 257 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 CAMPP49913 170 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 SSTP61278 116 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 RIGQ13278 110 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 WDR73Q6P4I2 378 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 RASL11AQ6T310 242 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 ZMAT5Q9UDW3 170 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 GOLT1BQ9Y3E0 138 aa5.84□□□□□ -1.47
DEPDC4-207ENST00000549249 PLAC8L1A1L4L8 177 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 K7EIL1 84 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 TRGC2P03986 189 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 APOC4P55056 127 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 CACNG7P62955 275 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 ZNF415Q09FC8 603 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 SLAQ13239 276 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 DEFB135Q30KP9 77 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 RNASE8Q8TDE3 154 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 TMEM208Q9BTX3 173 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 GNB1LQ9BYB4 327 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 GSN-AS1Q9NRJ2 163 aa5.83□□□□□ -1.48
DEPDC4-207ENST00000549249 M0R381 172 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 HLA-DQA1P01909 254 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 RAB4BP61018 213 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 FABP9Q0Z7S8 132 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 TWIST1Q15672 202 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 KIAA1644Q3SXP7 199 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 COX19Q49B96 90 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 SPANXN1Q5VSR9 72 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 ZNF493Q6ZR52 646 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 BORCS7Q96B45 105 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 RNF185Q96GF1 192 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 JPT2Q9H910 190 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 PHLDA3Q9Y5J5 127 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 TRAPPC1Q9Y5R8 145 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 X6R8D5 127 aa5.82□□□□□ -1.48
DEPDC4-207ENST00000549249 A0A1B0GW15 77 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms