RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 BPESC1Q9GZL8 116 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 AGRNO00468 2067 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 ABCA4P78363 2273 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 H3BUA1 57 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 SPRY2O43597 315 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 CIDEAO60543 219 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 CRYGDP07320 174 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 RNASE4P34096 147 aaKnown RBP7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 SCGB1D4Q6XE38 83 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 KIF25-AS1Q9Y6Z4 181 aa7.45□□□□□ -1.22
SMARCD1-205ENST00000548573 GNRH2O43555 120 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 TRBV12-3P01733 135 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 LINC00315P59091 139 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 HERVK_113P61574 105 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 DLX4Q92988 240 aaPredicted RBP7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 LINC00527Q9UJ94 153 aa7.44□□□□□ -1.22
SMARCD1-205ENST00000548573 IGIPA6NJ69 53 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 DUSP14O95147 198 aaKnown RBP7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 UCNP55089 124 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 SMAGPQ0VAQ4 97 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 PMVKQ15126 192 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 UBTD1Q9HAC8 227 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 WNK2Q9Y3S1 2297 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 IGLV4-69A0A075B6H9 119 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 NDUFS8O00217 210 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 TSHBP01222 138 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 DEFB1P60022 68 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 HRNRQ86YZ3 2850 aaPredicted RBP7.43□□□□□ -1.22
SMARCD1-205ENST00000548573 C11orf86A6NJI1 115 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 KLLNB2CW77 178 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 F6UB75 175 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 IGHV1-69P01742 117 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 CD7P09564 240 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 RPL11P62913 178 aaKnown RBP7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 TIMM17AQ99595 171 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 TP53TG1Q9Y2A0 90 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 A0A0J9YY99 117 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 VCYO14598 125 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 APOMO95445 188 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 TSPAN13O95857 204 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 UBE2D3P61077 147 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 UBE2D2P62837 147 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 FOXI1Q12951 378 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
SMARCD1-205ENST00000548573 IGHG2P01859 326 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 FAM159AQ6UWV7 190 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 KLHL30-AS1Q8NEE0 82 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 KIR2DL4Q99706 377 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 RHPN1-AS1Q9BWJ2 59 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 GVINP1Q7Z2Y8 2422 aa7.41□□□□□ -1.22
SMARCD1-205ENST00000548573 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 INSL3P51460 131 aa7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 LCNL1Q6ZST4 164 aa7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 NDUFA11Q86Y39 141 aa7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 RIF1Q5UIP0 2472 aaKnown RBP7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 TLN1Q9Y490 2541 aaKnown RBP7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 ZFHX2Q9C0A1 2572 aaPredicted RBP7.4□□□□□ -1.22
SMARCD1-205ENST00000548573 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.23
SMARCD1-205ENST00000548573 ZNF876PQ49A33 203 aa7.4□□□□□ -1.23
SMARCD1-205ENST00000548573 DAZ1Q9NQZ3 744 aaKnown RBP7.4□□□□□ -1.23
SMARCD1-205ENST00000548573 PTPRQQ9UMZ3 2332 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 IGHV3OR16-10A0A075B7F0 116 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 LGALS9O00182 355 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 ID1P41134 155 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 PSMB2P49721 201 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 SLC25A29Q8N8R3 303 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 A0A1B0GV72 72 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 K7EMT4 169 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 PF4V1P10720 104 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 BRD3OSQ6XYD6 125 aa7.39□□□□□ -1.23
SMARCD1-205ENST00000548573 RELNP78509 3460 aa7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 A6NDX4 124 aa7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 TCTEX1D4Q5JR98 221 aa7.38□□□□□ -1.23
SMARCD1-205ENST00000548573 ODF3Q96PU9 254 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms