RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FAM213BQ8TBF2 198 aa9.57□□□□□ -0.88
PTCH1-217ENST00000548420 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
PTCH1-217ENST00000548420 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
PTCH1-217ENST00000548420 LINC00588Q9Y4M8 146 aa9.57□□□□□ -0.88
PTCH1-217ENST00000548420 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
PTCH1-217ENST00000548420 PPT1P50897 306 aa9.56□□□□□ -0.88
PTCH1-217ENST00000548420 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-217ENST00000548420 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
PTCH1-217ENST00000548420 NAGKQ9UJ70 344 aa9.56□□□□□ -0.88
PTCH1-217ENST00000548420 TNXBP22105 4242 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 TRAV1-1A0A0B4J248 108 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 A0A0J9YY99 117 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 M0R2P5 195 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 PAGE4O60829 102 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 OXTP01178 125 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 H2AFB1P0C5Y9 115 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 RAB5CP51148 216 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 FHL2Q14192 279 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
PTCH1-217ENST00000548420 CRIP1P50238 77 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 CCL18P55774 89 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 SLAQ13239 276 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
PTCH1-217ENST00000548420 Q86TA4 180 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 SLC51BQ86UW2 128 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 FMC1Q96HJ9 113 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 PRO0255Q9UI72 69 aa9.54□□□□□ -0.88
PTCH1-217ENST00000548420 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 A0A096LPF7 62 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 FABP5P3A8MUU1 101 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 SULT1A2P50226 295 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 CRYBA4P53673 196 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 CCL20P78556 96 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 PTH2Q96A98 100 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
PTCH1-217ENST00000548420 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 LTAP01374 205 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 RNASE3P12724 160 aaKnown RBP9.52□□□□□ -0.89
PTCH1-217ENST00000548420 ESRGQ1W209 222 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 Q9H8V8 135 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 HHLA3Q9XRX5 114 aa9.52□□□□□ -0.89
PTCH1-217ENST00000548420 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 PAX4O43316 350 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 ZNF674Q2M3X9 581 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 ZC2HC1AQ96GY0 325 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
PTCH1-217ENST00000548420 A0A1B0GV50 99 aa9.5□□□□□ -0.89
PTCH1-217ENST00000548420 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
PTCH1-217ENST00000548420 SFTA3P0C7M3 94 aa9.5□□□□□ -0.89
PTCH1-217ENST00000548420 UBE2G1P62253 170 aa9.5□□□□□ -0.89
PTCH1-217ENST00000548420 MLST8Q9BVC4 326 aa9.5□□□□□ -0.89
PTCH1-217ENST00000548420 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 KRBOX1C9JBD0 128 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 PLA2G1BP04054 148 aaKnown RBP9.49□□□□□ -0.89
PTCH1-217ENST00000548420 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 PIK3CD-AS1Q5SR53 167 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 OR4C5Q8NGB2 326 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
PTCH1-217ENST00000548420 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
PTCH1-217ENST00000548420 TRGV4A0A0C4DH28 118 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 A0A1W2PPQ1 181 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 PGPEP1LA6NFU8 196 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 RS1O15537 224 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 CIDEAO60543 219 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 SH2D1AO60880 128 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 GCSHP23434 173 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 AKR1C3P42330 323 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 C11orf52Q96A22 123 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 ICOSQ9Y6W8 199 aa9.48□□□□□ -0.89
PTCH1-217ENST00000548420 B4DEV8 164 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 ORM1P02763 201 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 GATA1P15976 413 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-217ENST00000548420 LINC00315P59091 139 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-217ENST00000548420 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
PTCH1-217ENST00000548420 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 ZNF506Q5JVG8 444 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
PTCH1-217ENST00000548420 C9JCJ5 164 aa9.46□□□□□ -0.9
PTCH1-217ENST00000548420 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
PTCH1-217ENST00000548420 K7EQD1 137 aa9.46□□□□□ -0.9
PTCH1-217ENST00000548420 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
PTCH1-217ENST00000548420 BAGE2Q86Y30 109 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms