RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 Q9Y3F1 56 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 ESPL1Q14674 2120 aa2.29□□□□□ -2.04
SCAF11-210ENST00000547654 TMSB15BA0A087X1C1 80 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 A0A1W2PNN7 141 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 E7EQL1 145 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 SDCBPO00560 298 aaPredicted RBP2.28□□□□□ -2.04
SCAF11-210ENST00000547654 HIST1H2BKO60814 126 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 HIST1H2BJP06899 126 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 COX4I1P13073 169 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 GPX2P18283 190 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 DYNLT1P63172 113 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 SMIM21Q3B7S5 101 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 ZNF791Q3KP31 576 aaPredicted RBP2.28□□□□□ -2.04
SCAF11-210ENST00000547654 SOSTDC1Q6X4U4 206 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 OR8B3Q8NGG8 313 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 OR5D16Q8NGK9 328 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 TVP23CQ96ET8 276 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 PFDN5Q99471 154 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 COPZ2Q9P299 210 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 HSPB8Q9UJY1 196 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 CCL26Q9Y258 94 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 TRRAPQ9Y4A5 3859 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 SACSQ9NZJ4 4579 aa2.28□□□□□ -2.04
SCAF11-210ENST00000547654 NUP210Q8TEM1 1887 aaPredicted RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 A8MWV9 139 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 J3QQQ9 107 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 ZNF705BP0CI00 300 aaPredicted RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 RNASE2P10153 161 aaKnown RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 RPL35P42766 123 aaKnown RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 RPL26P61254 145 aaKnown RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 Q6ZQT0 140 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 LINC00305Q7Z4B0 112 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 LRRC28Q86X40 367 aaPredicted RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 C20orf166-AS1Q96NR2 134 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 BCL2L10Q9HD36 194 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 RPL26L1Q9UNX3 145 aaKnown RBP2.27□□□□□ -2.05
SCAF11-210ENST00000547654 PKDREJQ9NTG1 2253 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 WNK1Q9H4A3 2382 aa2.27□□□□□ -2.05
SCAF11-210ENST00000547654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.26□□□□□ -2.05
SCAF11-210ENST00000547654 IGHV1-58A0A0C4DH39 117 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 EFCAB10A6NFE3 127 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 RER1O15258 196 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 TIMM17BO60830 172 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 DPM2O94777 84 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 TNFSF15O95150 251 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 VMA21Q3ZAQ7 101 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 SPANXN5Q5MJ07 72 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 C4orf22Q6V702 233 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 Q6ZTI0 123 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 TCTE3Q8IZS6 198 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 AP1S3Q96PC3 154 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 TAS2R4Q9NYW5 299 aa2.26□□□□□ -2.05
SCAF11-210ENST00000547654 PAIP2BQ9ULR5 123 aaKnown RBP2.26□□□□□ -2.05
SCAF11-210ENST00000547654 ZANQ9Y493 2812 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 DIDO1Q9BTC0 2240 aaKnown RBP2.25□□□□□ -2.05
SCAF11-210ENST00000547654 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 C9JAW5 83 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 H3BMG7 143 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 SCTP09683 121 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 PEBP1P30086 187 aaKnown RBP2.25□□□□□ -2.05
SCAF11-210ENST00000547654 SDC4P31431 198 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 SLC38A11Q08AI6 406 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 ZNF345Q14585 488 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 NNATQ16517 81 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 C3orf56Q8N813 242 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 LINC00467Q9BRT7 94 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 HIGD1AQ9Y241 93 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 KNL1Q8NG31 2342 aa2.25□□□□□ -2.05
SCAF11-210ENST00000547654 PLXNB1O43157 2135 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
SCAF11-210ENST00000547654 VWFP04275 2813 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 IGKV1D-17A0A075B6S4 117 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 TRAV13-1A0A0B4J241 112 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 SDHAF1A6NFY7 115 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 OR2H2O95918 312 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 MT-ND6P03923 174 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 CTSDP07339 412 aaPredicted RBP2.24□□□□□ -2.05
SCAF11-210ENST00000547654 UBBP0CG47 229 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 MGST1P10620 155 aaKnown RBP2.24□□□□□ -2.05
SCAF11-210ENST00000547654 AQP4P55087 323 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 ESRGQ1W209 222 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 LYPD1Q8N2G4 141 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 ZC2HC1AQ96GY0 325 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 CALML5Q9NZT1 146 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
SCAF11-210ENST00000547654 SCN8AQ9UQD0 1980 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 MYH6P13533 1939 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 K7ERJ3 54 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 PROSCO94903 275 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 CLPSP04118 112 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 SHBGP04278 402 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 PAEPP09466 180 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 BAALC-AS2P0C853 105 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 MPC1LP0DKB6 136 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms