RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 NUP35Q8NFH5 326 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 ATP6V0E2Q8NHE4 81 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 CCL4L1Q8NHW4 92 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 MGST2Q99735 147 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 MAP1LC3AQ9H492 121 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 HIGD1BQ9P298 99 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 JPT1Q9UK76 154 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 ERG28Q9UKR5 140 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 TRBV20OR9-2A0A075B6H5 130 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 TRBV20-1A0A075B6N2 111 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 IGKV1-6A0A0C4DH72 117 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 SPTY2D1-AS1A0A0U1RR47 76 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 C21orf140B9A014 251 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 MUC22E2RYF6 1773 aaPredicted RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 H3BMG7 143 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 NCKAP5O14513 1909 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 IGHV3-7P01780 117 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 HBDP02042 147 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 SCGB1C2P0DMR2 95 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 IFITM1P13164 125 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 HSPE1P61604 102 aaKnown RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 RPL30P62888 115 aaKnown RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 PLGLAQ15195 96 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 Q6ZT83 130 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 PPDPFLQ8WWR9 84 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 PATE1Q8WXA2 126 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 TMEM126AQ9H061 195 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 SPANXB1Q9NS25 103 aaPredicted RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
CPNE8-204ENST00000546603 ZNF492Q9P255 531 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 SIGLEC9Q9Y336 463 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 SHANK1Q9Y566 2161 aa2.55□□□□□ -2
CPNE8-204ENST00000546603 IGHV3-15A0A0B4J1V0 119 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 TRAV5A0A0B4J249 113 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 LOC107984156A0A0G2JMH3 177 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 C17orf98A8MV24 154 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 A8MWV9 139 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 H3BVH4 76 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 DPM2O94777 84 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 OR2H2O95918 312 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 IGKV1-39P01597 117 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 IGKV1D-39P04432 117 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ZNF688P0C7X2 276 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 PLNP26678 52 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ASIPP42127 132 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ZNF137PP52743 207 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 PPP1CAP62136 330 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 CD164Q04900 197 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 HES1Q14469 280 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 TBC1D28Q2M2D7 210 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ETDBQ3ZM63 59 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.54□□□□□ -2
CPNE8-204ENST00000546603 UNQ9165/PRO28630Q6UXU0 137 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 MIR17HGQ75NE6 70 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ARL17AQ8IVW1 177 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ORMDL3Q8N138 153 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.54□□□□□ -2
CPNE8-204ENST00000546603 MYOZ3Q8TDC0 251 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 CT55Q8WUE5 264 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 IFI27L1Q96BM0 104 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 IGF2BP2-AS1Q96M15 143 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 PRELID3AQ96N28 172 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 ZNF714Q96N38 554 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
CPNE8-204ENST00000546603 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 EPDR1Q9UM22 224 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 UFC1Q9Y3C8 167 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 SPAG17Q6Q759 2223 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 NCOA6Q14686 2063 aaPredicted RBP2.54□□□□□ -2
CPNE8-204ENST00000546603 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
CPNE8-204ENST00000546603 TNRC6BQ9UPQ9 1833 aaKnown RBP2.54□□□□□ -2
CPNE8-204ENST00000546603 ALPK2Q86TB3 2170 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 C2orf16Q68DN1 1984 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 IGHV3-72A0A0B4J1Y9 119 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 TCRBV4S1A1TA0A5B7 111 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 PGPA6NDG6 321 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 IGLL5B9A064 214 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 J3QLI3 93 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 IGKCP01834 107 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 HLA-DRB4P13762 266 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 CKS2P33552 79 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 PSMB2P49721 201 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 UBE2E1P51965 193 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 CMC4P56277 68 aaPredicted RBP2.53□□□□□ -2
CPNE8-204ENST00000546603 DEFB103AP81534 67 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 WFDC2Q14508 124 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 RRN3P1Q2M238 152 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 C2orf91Q6ZV80 131 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 FAM19A1Q7Z5A9 133 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 OR1L8Q8NGR8 309 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 OR10X1Q8NGY0 326 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 OR13C6PQ8NH95 151 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 PTH2Q96A98 100 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 UBE2E2Q96LR5 201 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 NAA38Q9BRA0 125 aaKnown RBP2.53□□□□□ -2
CPNE8-204ENST00000546603 PRORYQ9H606 182 aa2.53□□□□□ -2
CPNE8-204ENST00000546603 HLA-DRB4X5D2U9 266 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms