RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 Q6ZQT7 251 aa13.55□□□□□ -0.24
TNFAIP1-202ENST00000544907 TEX29Q8N6K0 151 aa13.55□□□□□ -0.24
TNFAIP1-202ENST00000544907 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
TNFAIP1-202ENST00000544907 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP1-202ENST00000544907 CELSR1Q9NYQ6 3014 aa13.55□□□□□ -0.24
TNFAIP1-202ENST00000544907 SIVA1O15304 175 aa13.54□□□□□ -0.24
TNFAIP1-202ENST00000544907 AP1S3Q96PC3 154 aa13.54□□□□□ -0.24
TNFAIP1-202ENST00000544907 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 F6UB75 175 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 K7EQG2 157 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 CD5LO43866 347 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 FGF6P10767 208 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 RNASE3P12724 160 aaKnown RBP13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 RPL32P62910 135 aaKnown RBP13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 BOD1L2Q8IYS8 172 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 OR9G4Q8NGQ1 327 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 TMEM158Q8WZ71 300 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 SMIM2Q9BVW6 85 aa13.53□□□□□ -0.24
TNFAIP1-202ENST00000544907 SMIM17P0DL12 118 aa13.52□□□□□ -0.25
TNFAIP1-202ENST00000544907 ODF1Q14990 250 aa13.52□□□□□ -0.25
TNFAIP1-202ENST00000544907 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
TNFAIP1-202ENST00000544907 TFPI2P48307 235 aa13.51□□□□□ -0.25
TNFAIP1-202ENST00000544907 BVES-AS1Q5T3Y7 98 aa13.51□□□□□ -0.25
TNFAIP1-202ENST00000544907 FAM159AQ6UWV7 190 aa13.51□□□□□ -0.25
TNFAIP1-202ENST00000544907 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
TNFAIP1-202ENST00000544907 A0A0J9YX75 114 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 LINC01549A6NIU2 74 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 DUSP14O95147 198 aaKnown RBP13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 FOSL1P15407 271 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 G0S2P27469 103 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 ANKRD39Q53RE8 183 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 MPV17L2Q567V2 206 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 IGKV3-7A0A075B6H7 116 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 IGHV4OR15-8A0A075B7B6 117 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 A0A087WW49 117 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 C7orf71A4D174 169 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 NUDT3O95989 172 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 HLA-DRB4P13762 266 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 FXYD7P58549 80 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 DEFB1P60022 68 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 C2orf91Q6ZV80 131 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 HLA-DRB4X5D2U9 266 aa13.5□□□□□ -0.25
TNFAIP1-202ENST00000544907 TRAV2A0A0B4J234 112 aa13.49□□□□□ -0.25
TNFAIP1-202ENST00000544907 J3KRW8 73 aa13.49□□□□□ -0.25
TNFAIP1-202ENST00000544907 HOXA3O43365 443 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP1-202ENST00000544907 RASL10AQ92737 203 aa13.49□□□□□ -0.25
TNFAIP1-202ENST00000544907 TRAV26-2A0A0B4J265 109 aa13.48□□□□□ -0.25
TNFAIP1-202ENST00000544907 PRSS1P07477 247 aa13.48□□□□□ -0.25
TNFAIP1-202ENST00000544907 ACANP16112 2415 aa13.48□□□□□ -0.25
TNFAIP1-202ENST00000544907 TRAV12-1A0A0B4J245 112 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 GNRH2O43555 120 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 DPM2O94777 84 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 SRD5A1P18405 259 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 EDN2P20800 178 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 SEC11AP67812 179 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 FOXI2Q6ZQN5 318 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 C18orf15Q96N68 181 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 HHLA3Q9XRX5 114 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 KIF25-AS1Q9Y6Z4 181 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 IGKCP01834 107 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 SYNJ2BPP57105 145 aa13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 C14orf178Q8N769 122 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP1-202ENST00000544907 ZANQ9Y493 2812 aa13.46□□□□□ -0.25
TNFAIP1-202ENST00000544907 KRTAP1-1Q07627 177 aa13.46□□□□□ -0.26
TNFAIP1-202ENST00000544907 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.26
TNFAIP1-202ENST00000544907 TOMM6Q96B49 74 aa13.46□□□□□ -0.26
TNFAIP1-202ENST00000544907 C9orf85Q96MD7 179 aa13.46□□□□□ -0.26
TNFAIP1-202ENST00000544907 SMR3AQ99954 134 aa13.46□□□□□ -0.26
TNFAIP1-202ENST00000544907 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
TNFAIP1-202ENST00000544907 ZNF688P0C7X2 276 aa13.45□□□□□ -0.26
TNFAIP1-202ENST00000544907 CDKN1BP46527 198 aa13.45□□□□□ -0.26
TNFAIP1-202ENST00000544907 LINC00315P59091 139 aa13.45□□□□□ -0.26
TNFAIP1-202ENST00000544907 WFDC3Q8IUB2 231 aa13.45□□□□□ -0.26
TNFAIP1-202ENST00000544907 F8P00451 2351 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 A0A087WX48 190 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 PLNP26678 52 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 A8MTW9 85 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 LY6G6DO95868 133 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 TMEM97Q5BJF2 176 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 TP73-AS1Q9UF72 201 aa13.44□□□□□ -0.26
TNFAIP1-202ENST00000544907 CSPG4Q6UVK1 2322 aa13.43□□□□□ -0.26
TNFAIP1-202ENST00000544907 HSD52Q0P140 79 aa13.43□□□□□ -0.26
TNFAIP1-202ENST00000544907 SYT8Q8NBV8 401 aa13.43□□□□□ -0.26
TNFAIP1-202ENST00000544907 C4orf3Q8WVX3 66 aa13.43□□□□□ -0.26
TNFAIP1-202ENST00000544907 ZFHX3Q15911 3703 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 TRAV12-3A0A0B4J271 114 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 CD7P09564 240 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 NPSP0C0P6 89 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 ZNF124Q15973 351 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 YAE1D1Q9NRH1 226 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
TNFAIP1-202ENST00000544907 TRBV6-5A0A0K0K1A5 114 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms