RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	IGKV2D-26	A0A0A0MRZ7	120 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	TRAV25	A0A0B4J276	109 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268		D6R8Y8	96 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	IGHV4-31	P0DP07	118 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	C5orf47	Q569G3	176 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	CDIP1	Q9H305	208 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	LINC00527	Q9UJ94	153 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268	TEX15	Q9BXT5	2789 aa		11.52	□□□□□ -0.57
CHFR-223	ENST00000544268		Q6AWC8	147 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	RNF182	Q8N6D2	247 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	ZMAT4	Q9H898	229 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	ATP6V0E1	O15342	81 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	FOXI1	Q12951	378 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	C15orf32	Q32M92	178 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	LCNL1	Q6ZST4	164 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	TMEM219	Q86XT9	240 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	HHLA3	Q9XRX5	114 aa		11.51	□□□□□ -0.57
CHFR-223	ENST00000544268	TRBV6-1	A0A0K0K1D8	114 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268		A0A1B0GWB2	263 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	PRAC2	D3DTV9	90 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	APOM	O95445	188 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	TAL2	Q16559	108 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	C12orf74	Q32Q52	190 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	ORMDL3	Q8N138	153 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	SH2D1A	O60880	128 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	ERCC8	Q13216	396 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	LYZL1	Q6UWQ5	148 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	AMTN	Q6UX39	209 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	SYT8	Q8NBV8	401 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	ATP6V0E2	Q8NHE4	81 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	GLMP	Q8WWB7	406 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	ANAPC13	Q9BS18	74 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	C1QTNF4	Q9BXJ3	329 aa		11.5	□□□□□ -0.57
CHFR-223	ENST00000544268	FAM104B	Q5XKR9	115 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	ZNF575	Q86XF7	245 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	WFDC11	Q8NEX6	87 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	CITED2	Q99967	270 aa	Predicted RBP	11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	TTTY13	Q9BZ97	58 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	AAMDC	Q9H7C9	122 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268		A0A087WX48	190 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	WIPF1	O43516	503 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	HLA-DRB4	P13762	266 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	AMN1	Q8IY45	258 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	HLA-DRB4	X5D2U9	266 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	AKAP9	Q99996	3911 aa		11.49	□□□□□ -0.57
CHFR-223	ENST00000544268	SMKR1	H3BMG3	65 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268		J3QLI3	93 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	EVI2A	P22794	236 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	RRN3P1	Q2M238	152 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	PPDPF	Q9H3Y8	114 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	TLN2	Q9Y4G6	2542 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	MT-ATP8	P03928	68 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268		Q6ZQT7	251 aa		11.48	□□□□□ -0.57
CHFR-223	ENST00000544268	GAS8-AS1	O95177	125 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	CLEC19A	Q6UXS0	136 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268		Q6ZUT4	128 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	LYPD1	Q8N2G4	141 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	MSRB1	Q9NZV6	116 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	CUBN	O60494	3623 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	PPIF	P30405	207 aa	Known RBP	11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	PRR25	Q96S07	402 aa		11.47	□□□□□ -0.57
CHFR-223	ENST00000544268	FLNA	P21333	2647 aa	Known RBP	11.47	□□□□□ -0.57
CHFR-223	ENST00000544268		H3BUX3	64 aa		11.46	□□□□□ -0.57
CHFR-223	ENST00000544268	C5orf56	Q8N8D9	126 aa		11.46	□□□□□ -0.57
CHFR-223	ENST00000544268	CCDC140	Q96MF4	163 aa		11.46	□□□□□ -0.57
CHFR-223	ENST00000544268	MXRA5	Q9NR99	2828 aa		11.46	□□□□□ -0.57
CHFR-223	ENST00000544268		K7EMI3	77 aa		11.46	□□□□□ -0.58
CHFR-223	ENST00000544268	IGKC	P01834	107 aa		11.46	□□□□□ -0.58
CHFR-223	ENST00000544268	LY6E	Q16553	131 aa		11.46	□□□□□ -0.58
CHFR-223	ENST00000544268	MRPL51	Q4U2R6	128 aa	Known RBP	11.46	□□□□□ -0.58
CHFR-223	ENST00000544268	WFDC3	Q8IUB2	231 aa		11.46	□□□□□ -0.58
CHFR-223	ENST00000544268	MOB4	Q9Y3A3	225 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	CLPSL1	A2RUU4	121 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	XG	P55808	180 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	PDE6H	Q13956	83 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	PTH2	Q96A98	100 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	ZFAND3	Q9H8U3	227 aa		11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	FLNB	O75369	2602 aa	Known RBP	11.45	□□□□□ -0.58
CHFR-223	ENST00000544268	NHLRC4	P0CG21	123 aa	Predicted RBP	11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	RPL7	P18124	248 aa	Known RBP	11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	LINC01559	Q495D7	138 aa		11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	GTSCR1	Q86UQ5	136 aa		11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	TMEM190	Q8WZ59	177 aa		11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	BAHCC1	Q9P281	2608 aa		11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	DEFB112	Q30KQ8	113 aa		11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	CSDC2	Q9Y534	153 aa	Known RBP	11.44	□□□□□ -0.58
CHFR-223	ENST00000544268	NPY	P01303	97 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	CKS2	P33552	79 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	CFAP126	Q5VTH2	177 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268		A6NDX4	124 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	LINC01546	A6NGU7	62 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	DPM2	O94777	84 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	FSHB	P01225	129 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	PRSS1	P07477	247 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	ZC2HC1B	Q5TFG8	222 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	IL17REL	Q6ZVW7	336 aa		11.43	□□□□□ -0.58
CHFR-223	ENST00000544268	BUB3	O43684	328 aa		11.42	□□□□□ -0.58
CHFR-223	ENST00000544268	FCER1G	P30273	86 aa		11.42	□□□□□ -0.58
CHFR-223	ENST00000544268	NFE4	Q86UQ8	179 aa		11.42	□□□□□ -0.58
CHFR-223	ENST00000544268	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.42	□□□□□ -0.58

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