RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 NUPR2A6NF83 97 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ATP5G1P05496 136 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 GZMBP10144 247 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 FAM231DQ6ZW35 169 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ZNF575Q86XF7 245 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 RASL10AQ92737 203 aa10.27□□□□□ -0.77
TNFRSF1A-216ENST00000543995 C3orf84H3BNL1 204 aa10.26□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ISOC2Q96AB3 205 aa10.26□□□□□ -0.77
TNFRSF1A-216ENST00000543995 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
TNFRSF1A-216ENST00000543995 MUC4Q99102 2169 aa10.26□□□□□ -0.77
TNFRSF1A-216ENST00000543995 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 F5H768 121 aa10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 MED14OSP0DP75 135 aa10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 C15orf54Q8N8G6 183 aa10.25□□□□□ -0.77
TNFRSF1A-216ENST00000543995 F8W036 122 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 M0R381 172 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 KLK5Q9Y337 293 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 DNAH7Q8WXX0 4024 aa10.24□□□□□ -0.77
TNFRSF1A-216ENST00000543995 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ADCYAP1P18509 176 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SSTP61278 116 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 OR4C5Q8NGB2 326 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 PTH2Q96A98 100 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 A8MWL6 223 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SNAI2O43623 268 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 OR10G8Q8NGN5 311 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 OR10AG1Q8NH19 301 aa10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF1A-216ENST00000543995 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 IGLL5B9A064 214 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 CT83Q5H943 113 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 NDUFAF3Q9BU61 184 aa10.22□□□□□ -0.77
TNFRSF1A-216ENST00000543995 HOXA5P20719 270 aa10.21□□□□□ -0.78
TNFRSF1A-216ENST00000543995 PIK3CD-AS1Q5SR53 167 aa10.21□□□□□ -0.78
TNFRSF1A-216ENST00000543995 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.78
TNFRSF1A-216ENST00000543995 ZNF479Q96JC4 524 aa10.21□□□□□ -0.78
TNFRSF1A-216ENST00000543995 SEC11CQ9BY50 192 aa10.21□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 A8MWV9 139 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 F2Z2F3 143 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 V9GYV3 84 aa10.2□□□□□ -0.78
TNFRSF1A-216ENST00000543995 RS1O15537 224 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 CACNG7P62955 275 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 C10orf91Q5T1B1 145 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TMEM88Q6PEY1 159 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 NACAE9PAV3 2078 aa10.19□□□□□ -0.78
TNFRSF1A-216ENST00000543995 IGHV4-4A0A075B6R2 117 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 IGHV3-73A0A0B4J1V6 119 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 FHL2Q14192 279 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 FAM74A4Q5TZK3 123 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 JPT2Q9H910 190 aa10.18□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 A0A0J9YY99 117 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 HIGD1CA8MV81 97 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 NXPH4O95158 308 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 CTRLP40313 264 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 FAM210BQ96KR6 192 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 PGLYRP4Q96LB8 373 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 HHLA3Q9XRX5 114 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 A0A087WWL8 130 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 CIDEAO60543 219 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 NTF3P20783 257 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 SLAQ13239 276 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 RNF212Q495C1 297 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 ANAPC16Q96DE5 110 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 SAMD10Q9BYL1 202 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
TNFRSF1A-216ENST00000543995 FAM231BA6NCW3 169 aa10.16□□□□□ -0.78
TNFRSF1A-216ENST00000543995 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
TNFRSF1A-216ENST00000543995 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TCTAP57738 103 aa10.16□□□□□ -0.78
TNFRSF1A-216ENST00000543995 TWIST1Q15672 202 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms