RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MGAQ8IWI9 3026 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
SMG8-202ENST00000543872 LINC01587Q99440 93 aa9.7□□□□□ -0.86
SMG8-202ENST00000543872 APC2O95996 2303 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 COX6B1P14854 86 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 HERVK_113P61574 105 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 TMEM126AQ9H061 195 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 TRAV2A0A0B4J234 112 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 F8W735 103 aaPredicted RBP9.69□□□□□ -0.86
SMG8-202ENST00000543872 PRO3102Q9H379 93 aa9.69□□□□□ -0.86
SMG8-202ENST00000543872 AKAP6Q13023 2319 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 NBR2O15453 112 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 ASIPP42127 132 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 SRSF2Q01130 221 aaKnown RBP9.68□□□□□ -0.86
SMG8-202ENST00000543872 TCF15Q12870 199 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 ASCL5Q7RTU5 278 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 TIMD4Q96H15 378 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 ATMQ13315 3056 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 MBD3L4A6NDZ8 208 aaPredicted RBP9.68□□□□□ -0.86
SMG8-202ENST00000543872 MBD3L3A6NE82 208 aaPredicted RBP9.68□□□□□ -0.86
SMG8-202ENST00000543872 MBD3L5A6NJ08 208 aaPredicted RBP9.68□□□□□ -0.86
SMG8-202ENST00000543872 CTSGP08311 255 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
SMG8-202ENST00000543872 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
SMG8-202ENST00000543872 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
SMG8-202ENST00000543872 BSPH1Q075Z2 132 aa9.67□□□□□ -0.86
SMG8-202ENST00000543872 PRR30Q53SZ7 412 aaPredicted RBP9.67□□□□□ -0.86
SMG8-202ENST00000543872 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
SMG8-202ENST00000543872 TECTAO75443 2155 aa9.67□□□□□ -0.86
SMG8-202ENST00000543872 IGLV11-55A0A075B6I3 123 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 IGF1P05019 195 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 ELANEP08246 267 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 Q6Q795 121 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 ODF3Q96PU9 254 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 FAM215AQ9Y5M1 114 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 NDPQ00604 133 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 ZNF672Q499Z4 452 aaPredicted RBP9.66□□□□□ -0.86
SMG8-202ENST00000543872 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
SMG8-202ENST00000543872 PIEZO2Q9H5I5 2752 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 DMXL1Q9Y485 3027 aa9.66□□□□□ -0.86
SMG8-202ENST00000543872 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
SMG8-202ENST00000543872 RPL39P62891 51 aaKnown RBP9.65□□□□□ -0.86
SMG8-202ENST00000543872 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 TP53TG1Q9Y2A0 90 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 MSRB2Q9Y3D2 182 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 OOSP1A8MZH6 123 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 CRYGDP07320 174 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 DEFB109BQ30KR1 87 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 KLK5Q9Y337 293 aaPredicted RBP9.65□□□□□ -0.86
SMG8-202ENST00000543872 PHLDA3Q9Y5J5 127 aa9.65□□□□□ -0.86
SMG8-202ENST00000543872 SPTBN2O15020 2390 aa9.65□□□□□ -0.87
SMG8-202ENST00000543872 ZNF56Q15929 161 aa9.65□□□□□ -0.87
SMG8-202ENST00000543872 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
SMG8-202ENST00000543872 CD59P13987 128 aa9.64□□□□□ -0.87
SMG8-202ENST00000543872 LINC01620Q4KN68 170 aa9.64□□□□□ -0.87
SMG8-202ENST00000543872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
SMG8-202ENST00000543872 FOXC1Q12948 553 aa9.64□□□□□ -0.87
SMG8-202ENST00000543872 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
SMG8-202ENST00000543872 DEFB1P60022 68 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 J3QQQ9 107 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 PRR9Q5T870 116 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 ACACAQ13085 2346 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 PRSS2P07478 247 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 NUP37Q8NFH4 326 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
SMG8-202ENST00000543872 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 NBASA2RRP1 2371 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 ATXN8Q156A1 80 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 H3BMM0 161 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 BUB3O43684 328 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
SMG8-202ENST00000543872 TSHBP01222 138 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 UBE2WQ96B02 151 aa9.62□□□□□ -0.87
SMG8-202ENST00000543872 F5H697 171 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 NPFFO15130 113 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 PMVKQ15126 192 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 RNF5Q99942 180 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 DPM3Q9P2X0 92 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 KAAG1Q9UBP8 84 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 ADARB2-AS1A8MUL3 147 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 ECSCRQ19T08 205 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
SMG8-202ENST00000543872 LAMA5O15230 3695 aa9.61□□□□□ -0.87
SMG8-202ENST00000543872 CLEC19AQ6UXS0 136 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms