RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 K7EMI3 77 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 K7ERJ3 54 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 TAL2Q16559 108 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 RASL10AQ92737 203 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 PTPN13Q12923 2485 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 TOMM6Q96B49 74 aa12.56□□□□□ -0.4
KDM2B-216ENST00000543025 G3V4G9 280 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 CENPEQ02224 2701 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 MED14OSP0DP75 135 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
KDM2B-216ENST00000543025 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
KDM2B-216ENST00000543025 IGHV4-39P01824 125 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 USMG5Q96IX5 58 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 FAM19A4Q96LR4 140 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 H3BUA1 57 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
KDM2B-216ENST00000543025 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
KDM2B-216ENST00000543025 SPRY2O43597 315 aa12.53□□□□□ -0.4
KDM2B-216ENST00000543025 BRI3O95415 125 aa12.53□□□□□ -0.4
KDM2B-216ENST00000543025 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
KDM2B-216ENST00000543025 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
KDM2B-216ENST00000543025 DEFB1P60022 68 aa12.53□□□□□ -0.4
KDM2B-216ENST00000543025 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
KDM2B-216ENST00000543025 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
KDM2B-216ENST00000543025 MGPP08493 103 aa12.52□□□□□ -0.4
KDM2B-216ENST00000543025 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.4
KDM2B-216ENST00000543025 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 IGHV3-11P01762 117 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 IGHG2P01859 326 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 OR11H1Q8NG94 326 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 OR11H2Q8NH07 326 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
KDM2B-216ENST00000543025 PPP1R17O96001 155 aa12.51□□□□□ -0.41
KDM2B-216ENST00000543025 C2orf66Q6UXQ4 117 aa12.51□□□□□ -0.41
KDM2B-216ENST00000543025 F6UB75 175 aa12.51□□□□□ -0.41
KDM2B-216ENST00000543025 LY6EQ16553 131 aa12.51□□□□□ -0.41
KDM2B-216ENST00000543025 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 E9PLD3 99 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
KDM2B-216ENST00000543025 ATP5J2P56134 94 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 APCP25054 2843 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 IGLL5B9A064 214 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 GNRH2O43555 120 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
KDM2B-216ENST00000543025 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 LINC01619G3V211 115 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 PF4V1P10720 104 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 PIMREGQ9BSJ6 248 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
KDM2B-216ENST00000543025 TRBV7-3A0A075B6L6 115 aa12.48□□□□□ -0.41
KDM2B-216ENST00000543025 IGHV4-61A0A0C4DH41 118 aa12.48□□□□□ -0.41
KDM2B-216ENST00000543025 H3BUX3 64 aa12.48□□□□□ -0.41
KDM2B-216ENST00000543025 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
KDM2B-216ENST00000543025 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
KDM2B-216ENST00000543025 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
KDM2B-216ENST00000543025 DAZ1Q9NQZ3 744 aaKnown RBP12.48□□□□□ -0.41
KDM2B-216ENST00000543025 POLQO75417 2590 aa12.47□□□□□ -0.41
KDM2B-216ENST00000543025 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
KDM2B-216ENST00000543025 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
KDM2B-216ENST00000543025 A6NDX4 124 aa12.47□□□□□ -0.41
KDM2B-216ENST00000543025 NXPH4O95158 308 aa12.47□□□□□ -0.41
KDM2B-216ENST00000543025 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
KDM2B-216ENST00000543025 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.42
KDM2B-216ENST00000543025 BLCAPP62952 87 aa12.46□□□□□ -0.42
KDM2B-216ENST00000543025 RPL24P83731 157 aaKnown RBP12.46□□□□□ -0.42
KDM2B-216ENST00000543025 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.42
KDM2B-216ENST00000543025 KLLNB2CW77 178 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 HECTD1Q9ULT8 2610 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 F8W1H4 67 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 IGLV1-40P01703 118 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 FAM159AQ6UWV7 190 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 PRADC1Q9BSG0 188 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
KDM2B-216ENST00000543025 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 LGALS1P09382 135 aaKnown RBP12.44□□□□□ -0.42
KDM2B-216ENST00000543025 CLEC2AQ6UVW9 174 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 C10orf105Q8TEF2 133 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 CYSLTR1Q9Y271 337 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 UNC79Q9P2D8 2635 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 IGHV4OR15-8A0A075B7B6 117 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 A0A087WW49 117 aa12.44□□□□□ -0.42
KDM2B-216ENST00000543025 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms