RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 SRSF9Q13242 221 aaKnown RBP eCLIP9.78□□□□□ -0.84
DDX11-223ENST00000542838 FAM223AQ8IWN6 122 aa9.78□□□□□ -0.84
DDX11-223ENST00000542838 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
DDX11-223ENST00000542838 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
DDX11-223ENST00000542838 TRBV12-3P01733 135 aa9.77□□□□□ -0.84
DDX11-223ENST00000542838 INSL3P51460 131 aa9.77□□□□□ -0.84
DDX11-223ENST00000542838 RPL11P62913 178 aaKnown RBP9.77□□□□□ -0.84
DDX11-223ENST00000542838 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.85
DDX11-223ENST00000542838 A6NJY4 79 aa9.77□□□□□ -0.85
DDX11-223ENST00000542838 F6UB75 175 aa9.77□□□□□ -0.85
DDX11-223ENST00000542838 CIDEAO60543 219 aa9.77□□□□□ -0.85
DDX11-223ENST00000542838 IGKV3-7A0A075B6H7 116 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 LINC01549A6NIU2 74 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
DDX11-223ENST00000542838 ATP6V0BQ99437 205 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 MOB4Q9Y3A3 225 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 IGHV3OR16-10A0A075B7F0 116 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 SOCS3O14543 225 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 MED14OSP0DP75 135 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 RNASE3P12724 160 aaKnown RBP9.76□□□□□ -0.85
DDX11-223ENST00000542838 KLHL30-AS1Q8NEE0 82 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 UBTD1Q9HAC8 227 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 NDUFS8O00217 210 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 PPP1R17O96001 155 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 LMO4P61968 165 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 BPESC1Q9GZL8 116 aa9.76□□□□□ -0.85
DDX11-223ENST00000542838 NDUFA4O00483 81 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 APOMO95445 188 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 COX6B1P14854 86 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 CRYGDP07320 174 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 EMP1P54849 157 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 C19orf54Q5BKX5 351 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
DDX11-223ENST00000542838 CEP295Q9C0D2 2601 aa9.75□□□□□ -0.85
DDX11-223ENST00000542838 LOC107984156A0A0G2JMH3 177 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 ARL17AQ8IVW1 177 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 NBL1P41271 181 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 PSMB2P49721 201 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 FAM19A4Q96LR4 140 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 MUC4Q99102 2169 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 UBE2D1P51668 147 aa9.74□□□□□ -0.85
DDX11-223ENST00000542838 TSPAN13O95857 204 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 HERVK_113P61574 105 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 KLRB1Q12918 225 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 TSHBP01222 138 aa9.73□□□□□ -0.85
DDX11-223ENST00000542838 IGHV1-69DA0A0B4J2H0 117 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
DDX11-223ENST00000542838 FOXI1Q12951 378 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 SMCPP49901 116 aaPredicted RBP9.72□□□□□ -0.85
DDX11-223ENST00000542838 PAPPA-AS1Q5QFB9 102 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 ZFP2Q6ZN57 461 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 APRG1Q8IVJ8 170 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 C1QTNF4Q9BXJ3 329 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 JPT2Q9H910 190 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 KIF25-AS1Q9Y6Z4 181 aa9.72□□□□□ -0.85
DDX11-223ENST00000542838 ASH1LQ9NR48 2969 aaKnown RBP9.72□□□□□ -0.85
DDX11-223ENST00000542838 LINC00315P59091 139 aa9.71□□□□□ -0.85
DDX11-223ENST00000542838 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.85
DDX11-223ENST00000542838 PMVKQ15126 192 aa9.71□□□□□ -0.85
DDX11-223ENST00000542838 BRD3OSQ6XYD6 125 aa9.71□□□□□ -0.85
DDX11-223ENST00000542838 IGHV4OR15-8A0A075B7B6 117 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 A0A087WW49 117 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 A0A0J9YY99 117 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 IGIPA6NJ69 53 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 CD7P09564 240 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 SRD5A1P18405 259 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 ZNF418Q8TF45 676 aaPredicted RBP9.71□□□□□ -0.86
DDX11-223ENST00000542838 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.86
DDX11-223ENST00000542838 F5H697 171 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 NXPH4O95158 308 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 POLR2KP53803 58 aaKnown RBP9.7□□□□□ -0.86
DDX11-223ENST00000542838 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 AKAP6Q13023 2319 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 A0A087WWL8 130 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 A0A1B0GV72 72 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
DDX11-223ENST00000542838 LY6EQ16553 131 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 COL6A6A6NMZ7 2263 aa9.7□□□□□ -0.86
DDX11-223ENST00000542838 MUC6Q6W4X9 2439 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 VCYO14598 125 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 PF4V1P10720 104 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 NDUFA11Q86Y39 141 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 UBE2D3P61077 147 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 UBE2D2P62837 147 aa9.69□□□□□ -0.86
DDX11-223ENST00000542838 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms