RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 TMEM75Q8N9X5 138 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 OR4B1Q8NGF8 309 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 OR8A1Q8NGG7 326 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 DAZAP1Q96EP5 407 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 LINC00477Q96M19 166 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 BIN3Q9NQY0 253 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 ZFP30Q9Y2G7 519 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 KLF12Q9Y4X4 402 aa5.29□□□□□ -1.56
CHMP4A-209ENST00000542700 TRBV6-1A0A0K0K1D8 114 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 RBAKDNA6NC62 111 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 FBLL1A6NHQ2 334 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 B4DEV8 164 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 J3KRW8 73 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 GATCO43716 136 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 SCO1O75880 301 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 MT-ND4LP03901 98 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 ZNF138P52744 262 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 DAD1P61803 113 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 ATRAIDQ6UW56 229 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 C9orf47Q6ZRZ4 202 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 TMEM183AQ8IXX5 376 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 OR10G8Q8NGN5 311 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 ZNF492Q9P255 531 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 LY96Q9Y6Y9 160 aa5.28□□□□□ -1.56
CHMP4A-209ENST00000542700 TRBV20OR9-2A0A075B6H5 130 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 GCGP01275 180 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 IGLV2-8P01709 118 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 CT45A10P0DMU9 189 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 SMUG1Q53HV7 270 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 ACTL10Q5JWF8 245 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 Q86TA4 180 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 LINC01551Q86U37 167 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 C15orf54Q8N8G6 183 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 Q8TAT8 98 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 ISOC2Q96AB3 205 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 IGF2BP2-AS1Q96M15 143 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
CHMP4A-209ENST00000542700 A0A0J9YX75 114 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 FABP5P3A8MUU1 101 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 ZNF705GA8MUZ8 300 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 NPIPB6E9PJ23 425 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 K7EN84 100 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 PPP1R2P9O14990 202 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 LTAP01374 205 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 GPX1P07203 203 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 HNRNPA3P51991 378 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 FXYD7P58549 80 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 BTN1A1Q13410 526 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 ODF1Q14990 250 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 RHEBQ15382 184 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 IBA57Q5T440 356 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 GDF5OSQ5U4N7 250 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 FOXI2Q6ZQN5 318 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 NUDT10Q8NFP7 164 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 NUDT11Q96G61 164 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 ZC2HC1AQ96GY0 325 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 CTDSP1Q9GZU7 261 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 RNASE7Q9H1E1 156 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 SAV1Q9H4B6 383 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 XCL2Q9UBD3 114 aa5.26□□□□□ -1.57
CHMP4A-209ENST00000542700 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 F5H768 121 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 H7BYZ3 331 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 RNASE4P34096 147 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 LEPP41159 167 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 SMIM12Q96EX1 92 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 SFRP2Q96HF1 295 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 LENEPQ9Y5L5 61 aa5.25□□□□□ -1.57
CHMP4A-209ENST00000542700 A0A087WWC5 75 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 H3BMM0 161 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 P01737 135 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 ORM1P02763 201 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 S100PP25815 95 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 TSPOP30536 169 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 ZNF80P51504 273 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 FAM231DQ6ZW35 169 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 OR2D3Q8NGH3 330 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 NEU1Q99519 415 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 UPK3BQ9BT76 320 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 MLST8Q9BVC4 326 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 SMCO4Q9NRQ5 59 aa5.24□□□□□ -1.57
CHMP4A-209ENST00000542700 TMSB15BA0A087X1C1 80 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 GRIFINA4D1Z8 144 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 A8MWL6 223 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 SH2D1AO60880 128 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 HLA-DRB4P13762 266 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 CRIP1P50238 77 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 SPINK13Q1W4C9 94 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 FAM162BQ5T6X4 162 aa5.23□□□□□ -1.57
CHMP4A-209ENST00000542700 KCNIP4Q6PIL6 250 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms