RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
GTDC1-219ENST00000542155 GOLT1BQ9Y3E0 138 aa12.44□□□□□ -0.42
GTDC1-219ENST00000542155 TRAV9-1A0A075B6T8 112 aa12.43□□□□□ -0.42
GTDC1-219ENST00000542155 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
GTDC1-219ENST00000542155 CNFNQ9BYD5 112 aa12.43□□□□□ -0.42
GTDC1-219ENST00000542155 X6R8D5 127 aa12.43□□□□□ -0.42
GTDC1-219ENST00000542155 RNASE8Q8TDE3 154 aaKnown RBP12.42□□□□□ -0.42
GTDC1-219ENST00000542155 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
GTDC1-219ENST00000542155 F2Z2F3 143 aa12.42□□□□□ -0.42
GTDC1-219ENST00000542155 M0R381 172 aa12.42□□□□□ -0.42
GTDC1-219ENST00000542155 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
GTDC1-219ENST00000542155 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
GTDC1-219ENST00000542155 RPS10P46783 165 aaKnown RBP12.41□□□□□ -0.42
GTDC1-219ENST00000542155 TWIST1Q15672 202 aa12.41□□□□□ -0.42
GTDC1-219ENST00000542155 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
GTDC1-219ENST00000542155 JPT2Q9H910 190 aa12.41□□□□□ -0.42
GTDC1-219ENST00000542155 PHLDA3Q9Y5J5 127 aa12.41□□□□□ -0.42
GTDC1-219ENST00000542155 RETNQ9HD89 108 aa12.4□□□□□ -0.42
GTDC1-219ENST00000542155 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
GTDC1-219ENST00000542155 HBBP68871 147 aa12.39□□□□□ -0.43
GTDC1-219ENST00000542155 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
GTDC1-219ENST00000542155 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
GTDC1-219ENST00000542155 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
GTDC1-219ENST00000542155 IGHV4-4A0A075B6R2 117 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 RAB4BP61018 213 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 RIGQ13278 110 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
GTDC1-219ENST00000542155 RNF183Q96D59 192 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 TRGC2P03986 189 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 EVI2AP22794 236 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 RRN3P1Q2M238 152 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 Q6ZWC4 215 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 OR11H2Q8NH07 326 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
GTDC1-219ENST00000542155 UBE2CO00762 179 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 PHOX2AO14813 284 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 SLAQ13239 276 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 DEFB4AO15263 64 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 NXPH4O95158 308 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 BORCS7Q96B45 105 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 OVOL2Q9BRP0 275 aa12.37□□□□□ -0.43
GTDC1-219ENST00000542155 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 EMP1P54849 157 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 ZNF876PQ49A33 203 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 GNB1LQ9BYB4 327 aa12.36□□□□□ -0.43
GTDC1-219ENST00000542155 MRPL16Q9NX20 251 aaKnown RBP12.36□□□□□ -0.43
GTDC1-219ENST00000542155 CACNG7P62955 275 aa12.35□□□□□ -0.43
GTDC1-219ENST00000542155 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
GTDC1-219ENST00000542155 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
GTDC1-219ENST00000542155 NOP10Q9NPE3 64 aaKnown RBP12.35□□□□□ -0.43
GTDC1-219ENST00000542155 TRAPPC1Q9Y5R8 145 aa12.35□□□□□ -0.43
GTDC1-219ENST00000542155 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
GTDC1-219ENST00000542155 AMN1Q8IY45 258 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 C16orf74Q96GX8 76 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
GTDC1-219ENST00000542155 M0R2P5 195 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 ZFP82Q8N141 532 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
GTDC1-219ENST00000542155 GATD1Q8NB37 220 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 FRZBQ92765 325 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
GTDC1-219ENST00000542155 Q6ZTI0 123 aa12.34□□□□□ -0.43
GTDC1-219ENST00000542155 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 Q8NAQ8 132 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 A0A087WWL8 130 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 TMEM191AQ9H0A3 160 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
GTDC1-219ENST00000542155 A0A1B0GW15 77 aa12.32□□□□□ -0.44
GTDC1-219ENST00000542155 SPXQ9BT56 116 aa12.32□□□□□ -0.44
GTDC1-219ENST00000542155 LINC00315P59091 139 aa12.32□□□□□ -0.44
GTDC1-219ENST00000542155 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
GTDC1-219ENST00000542155 POM121L12Q8N7R1 296 aa12.32□□□□□ -0.44
GTDC1-219ENST00000542155 PRKDCP78527 4128 aaKnown RBP12.31□□□□□ -0.44
GTDC1-219ENST00000542155 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 CRYGDP07320 174 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 FAM104BQ5XKR9 115 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 RASL10AQ92737 203 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 APCSP02743 223 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
GTDC1-219ENST00000542155 RAB4AP20338 218 aa12.3□□□□□ -0.44
GTDC1-219ENST00000542155 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
GTDC1-219ENST00000542155 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
GTDC1-219ENST00000542155 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
GTDC1-219ENST00000542155 SYT8Q8NBV8 401 aa12.29□□□□□ -0.44
GTDC1-219ENST00000542155 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
GTDC1-219ENST00000542155 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms