RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
YBX3-212ENST00000542002 TRAV4A0A0B4J268 109 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 B4DEV8 164 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 M0R036 132 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 RTL8CO15255 209 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 IGLV2-8P01709 118 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 RPL35P42766 123 aaKnown RBP6.71□□□□□ -1.34
YBX3-212ENST00000542002 CCL18P55774 89 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 FAM162BQ5T6X4 162 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 CFAP126Q5VTH2 177 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 Q6ZSN1 163 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 BAGE2Q86Y30 109 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 OR4C5Q8NGB2 326 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 C11orf52Q96A22 123 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 PTH2Q96A98 100 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 JPT2Q9H910 190 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 MANBALQ9NQG1 85 aa6.71□□□□□ -1.34
YBX3-212ENST00000542002 TMSB15BA0A087X1C1 80 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 TRGV4A0A0C4DH28 118 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 RS1O15537 224 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 S100A9P06702 114 aaKnown RBP6.7□□□□□ -1.34
YBX3-212ENST00000542002 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 FAM3BP58499 235 aaPredicted RBP6.7□□□□□ -1.34
YBX3-212ENST00000542002 RPL19P84098 196 aaKnown RBP6.7□□□□□ -1.34
YBX3-212ENST00000542002 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 DNLZQ5SXM8 178 aa6.7□□□□□ -1.34
YBX3-212ENST00000542002 H3BVH4 76 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 K7EQD1 137 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 GATA1P15976 413 aaPredicted RBP6.69□□□□□ -1.34
YBX3-212ENST00000542002 MEF2BQ02080 365 aaPredicted RBP6.69□□□□□ -1.34
YBX3-212ENST00000542002 SLAQ13239 276 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 LYPD6BQ8NI32 183 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 SAMD10Q9BYL1 202 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 Q9H8V8 135 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 SCRT2Q9NQ03 307 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 IL36BQ9NZH7 164 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 Q9UF83 564 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 MUC4Q99102 2169 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 PKD1P98161 4303 aa6.69□□□□□ -1.34
YBX3-212ENST00000542002 TRBV20OR9-2A0A075B6H5 130 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 NBDYA0A0U1RRE5 68 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 BCL2P10415 239 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 GYPEP15421 78 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 S100A4P26447 101 aaKnown RBP6.68□□□□□ -1.34
YBX3-212ENST00000542002 ASIPP42127 132 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 UPK3BQ9BT76 320 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 VAX2Q9UIW0 290 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 MRPS16Q9Y3D3 137 aaKnown RBP6.68□□□□□ -1.34
YBX3-212ENST00000542002 ICOSQ9Y6W8 199 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
YBX3-212ENST00000542002 TEX46H3BTG2 121 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 MRPL23Q16540 153 aaKnown RBP6.67□□□□□ -1.34
YBX3-212ENST00000542002 CENPWQ5EE01 88 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 PRR27Q6MZM9 219 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 TXNDC17Q9BRA2 123 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 PARLQ9H300 379 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 MED9Q9NWA0 146 aa6.67□□□□□ -1.34
YBX3-212ENST00000542002 MUC21A0A0G2JKD1 596 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 MUC21A0A140T8X8 626 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 PDE6DO43924 150 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 CRYGDP07320 174 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 BLOC1S1P78537 153 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 PIK3CD-AS1Q5SR53 167 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 NEGR1Q7Z3B1 354 aa6.66□□□□□ -1.34
YBX3-212ENST00000542002 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 C19orf71A6NCJ1 209 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 NXPH4O95158 308 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 IFNA1P01562 189 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 GZMBP10144 247 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 C14orf178Q8N769 122 aaPredicted RBP6.65□□□□□ -1.34
YBX3-212ENST00000542002 PCNPQ8WW12 178 aaKnown RBP6.65□□□□□ -1.34
YBX3-212ENST00000542002 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
YBX3-212ENST00000542002 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.34
YBX3-212ENST00000542002 A0A087WWL8 130 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 TRBV6-4A0A1B0GX49 114 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 A8MWV9 139 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 K7EN84 100 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 M0R381 172 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
YBX3-212ENST00000542002 SRIP30626 198 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 GNG4P50150 75 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 ZFP2Q6ZN57 461 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 OR10AG1Q8NH19 301 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 OCC1Q8TAD7 63 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 PHLDA3Q9Y5J5 127 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 TNFRSF18Q9Y5U5 241 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 PKHD1P08F94 4074 aa6.64□□□□□ -1.35
YBX3-212ENST00000542002 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
YBX3-212ENST00000542002 SNAI2O43623 268 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms