RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RAB2BQ8WUD1 216 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 UBE2WQ96B02 151 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 DNAJC30Q96LL9 226 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 ATP5SQ99766 215 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 GGACTQ9BVM4 153 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 PSENENQ9NZ42 101 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 CCDC59Q9P031 241 aaKnown RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM14CQ9P0S9 112 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 EXTL2Q9UBQ6 330 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 RAB26Q9ULW5 256 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 RABL2BQ9UNT1 228 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 TIMM9Q9Y5J7 89 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 A0A087WX48 190 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 A0A087WYN8 130 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 C5orf51A6NDU8 294 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 PHOX2AO14813 284 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 PRSS1P07477 247 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 LINC00694P0DN24 101 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 INPP1P49441 399 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 LSM3P62310 102 aaKnown RBP2.88□□□□□ -1.95
SNHG1-214ENST00000540865 ARL16Q0P5N6 197 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 CFAP126Q5VTH2 177 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM14EPQ6UXP3 125 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 IZUMO2Q6UXV1 221 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 Q6ZRG5 221 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 CLVS1Q8IUQ0 354 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-214ENST00000540865 EXOC3-AS1Q8N2X6 119 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 CYB561D1Q8N8Q1 229 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 SMIM8Q96KF7 97 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 PFDN5Q99471 154 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 SLC39A9Q9NUM3 307 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 PLAC8Q9NZF1 115 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 SCP2D1Q9UJQ7 156 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 LENEPQ9Y5L5 61 aa2.88□□□□□ -1.95
SNHG1-214ENST00000540865 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 ANKRD20A5PA0PJZ0 165 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 PGPA6NDG6 321 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 TAAR5O14804 337 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 GNRH2O43555 120 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 METTL15P1P0C7V9 234 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 CAMLGP49069 296 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 FGF8P55075 233 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-214ENST00000540865 TAS2R30P59541 319 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
SNHG1-214ENST00000540865 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
SNHG1-214ENST00000540865 GAGE5Q13069 117 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 ZNF876PQ49A33 203 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM128Q5BJH2 165 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 KCNIP4Q6PIL6 250 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 Q8TAT8 98 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 DYNC2LI1Q8TCX1 351 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 SMIM4Q8WVI0 70 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 AP3S1Q92572 193 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 PTH2Q96A98 100 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 MGST2Q99735 147 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 SOSTQ9BQB4 213 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 GPN1Q9HCN4 374 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-214ENST00000540865 SDF2L1Q9HCN8 221 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 NAGKQ9UJ70 344 aa2.87□□□□□ -1.95
SNHG1-214ENST00000540865 IGHV3-64A0A075B6Q5 118 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 TRAV21A0A0B4J279 112 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 CTDSPLO15194 276 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 TSC22D2O75157 780 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 TYMSP04818 313 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 SMIM18P0DKX4 95 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 PYYP10082 97 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 CSN1S1P47710 185 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 RPL29P47914 159 aaKnown RBP2.86□□□□□ -1.95
SNHG1-214ENST00000540865 NCS1P62166 190 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 UBE2V1Q13404 147 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 ENHOQ6UWT2 76 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 ZFP2Q6ZN57 461 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 SMIM29Q86T20 159 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 THAP6Q8TBB0 222 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 KCNS1Q96KK3 526 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 VAX2Q9UIW0 290 aa2.86□□□□□ -1.95
SNHG1-214ENST00000540865 SSSCA1O60232 199 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 SFT2D2O95562 160 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 CRPP02741 224 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 NBEAP1P0C6P0 100 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 CAV2P51636 162 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 VBP1P61758 197 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
SNHG1-214ENST00000540865 MIAQ16674 131 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 MIC13Q5XKP0 118 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 Q75L30 129 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 GTSF1Q8WW33 167 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 LINC00479Q96M42 142 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 C20orf85Q9H1P6 137 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms