RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 C15orf53Q8NAA6 179 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 HIST1H2BAQ96A08 127 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 C11orf21Q9P2W6 132 aa6.14□□□□□ -1.43
TRAPPC1-202ENST00000540486 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
TRAPPC1-202ENST00000540486 K7EQM0 130 aa6.13□□□□□ -1.43
TRAPPC1-202ENST00000540486 CRIP1P50238 77 aa6.13□□□□□ -1.43
TRAPPC1-202ENST00000540486 TDRG1Q3Y452 100 aa6.13□□□□□ -1.43
TRAPPC1-202ENST00000540486 ARL2-SNX15V9GYD0 113 aa6.13□□□□□ -1.43
TRAPPC1-202ENST00000540486 TRAV21A0A0B4J279 112 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 FBLL1A6NHQ2 334 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 SNURFLB1AK76 121 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 SPINK4O60575 86 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GAGE7O76087 117 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GCGP01275 180 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GAGE12FP0CL80 117 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GAGE12GP0CL81 117 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 GAGE12IP0CL82 117 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 HTN3P15516 51 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 TCL1AP56279 114 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 SAPCD1Q5SSQ6 148 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 IBA57Q5T440 356 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 FAM159AQ6UWV7 190 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 ALKAL2Q6UX46 152 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 Q6ZTI0 123 aa6.12□□□□□ -1.43
TRAPPC1-202ENST00000540486 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 IGKV3D-20A0A0C4DH25 116 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 IGHV3-16A0A0C4DH30 117 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TRBV6-1A0A0K0K1D8 114 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TYMSP04818 313 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 ATP5G1P05496 136 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 PFN1P07737 140 aaKnown RBP6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 HOXA5P20719 270 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TMEM183BQ1AE95 376 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 SMUG1Q53HV7 270 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TTC32Q5I0X7 151 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 COX8CQ7Z4L0 72 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TMEM183AQ8IXX5 376 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 ZNF680Q8NEM1 530 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 DEFB104AQ8WTQ1 72 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 TCEAL7Q9BRU2 100 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 NDFIP1Q9BT67 221 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 GNG13Q9P2W3 67 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 ZFP30Q9Y2G7 519 aa6.11□□□□□ -1.43
TRAPPC1-202ENST00000540486 FABP5P3A8MUU1 101 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 F5H768 121 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 LTAP01374 205 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 PPT1P50897 306 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 CCL18P55774 89 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 TMEM88Q6PEY1 159 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 Q86TA4 180 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 LYPD6BQ8NI32 183 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 ZC2HC1AQ96GY0 325 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 FMC1Q96HJ9 113 aa6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
TRAPPC1-202ENST00000540486 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 TRGV1A0A0A0MS02 117 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 AKR1C3P42330 323 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 UBE2G1P62253 170 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 ZNF415Q09FC8 603 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 ZNF674Q2M3X9 581 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 RASL10AQ92737 203 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 KCNS1Q96KK3 526 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 MANBALQ9NQG1 85 aa6.09□□□□□ -1.43
TRAPPC1-202ENST00000540486 TEX46H3BTG2 121 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 OXTP01178 125 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 S100A9P06702 114 aaKnown RBP6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 RNASE3P12724 160 aaKnown RBP6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 BLOC1S1P78537 153 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 OR5I1Q13606 314 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 BAGE2Q86Y30 109 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 NHLRC2Q8NBF2 726 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 C11orf52Q96A22 123 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 TXNDC17Q9BRA2 123 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 SPXQ9BT56 116 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 DERL1Q9BUN8 251 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 Q9H8V8 135 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 SDF2L1Q9HCN8 221 aa6.08□□□□□ -1.44
TRAPPC1-202ENST00000540486 TRGV2A0A075B6R0 118 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 A0A1W2PPQ1 181 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 RAB19A4D1S5 217 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 PGPEP1LA6NFU8 196 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 KRBOX1C9JBD0 128 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 M0R2P5 195 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 SH2D1AO60880 128 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 IGLV2-8P01709 118 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 BCL2P10415 239 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 MEF2BQ02080 365 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 FHL2Q14192 279 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 VSIG2Q96IQ7 327 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 C9orf85Q96MD7 179 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 VAX2Q9UIW0 290 aa6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-202ENST00000540486 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
TRAPPC1-202ENST00000540486 A0A0J9YY99 117 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms