RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 LINC00479Q96M42 142 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 CYTL1Q9NRR1 136 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 FAM74A7A6NL05 159 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 EREGO14944 169 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 RHOHQ15669 191 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 ZFP69Q49AA0 526 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 ZFP2Q6ZN57 461 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
SEMA4D-223ENST00000540475 FXYD6-FXYD2A0A087WZ82 144 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 FABP5P3A8MUU1 101 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 CRYGDP07320 174 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 MGST1P10620 155 aaKnown RBP8.82□□□□□ -1
SEMA4D-223ENST00000540475 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 ARL2-SNX15V9GYD0 113 aa8.82□□□□□ -1
SEMA4D-223ENST00000540475 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 TRBV6-1A0A0K0K1D8 114 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 PEX7O00628 323 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 LINC00694P0DN24 101 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 CRIP1P50238 77 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 PPT1P50897 306 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 SCRT2Q9NQ03 307 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 IL36BQ9NZH7 164 aa8.81□□□□□ -1
SEMA4D-223ENST00000540475 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 A8MWV9 139 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 FHITP49789 147 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 XGP55808 180 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 LELP1Q5T871 98 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 Q6ZSN1 163 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 TCEAL7Q9BRU2 100 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 PARLQ9H300 379 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 ZFP30Q9Y2G7 519 aa8.8□□□□□ -1
SEMA4D-223ENST00000540475 TRAV8-6A0A0B4J262 113 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 KRBOX1C9JBD0 128 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 IFNA7P01567 189 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 UBE2G2P60604 165 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 RGS21Q2M5E4 152 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 AKR1C8PQ5T2L2 129 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 Q86TA4 180 aa8.79□□□□□ -1
SEMA4D-223ENST00000540475 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
SEMA4D-223ENST00000540475 FGF8P55075 233 aaPredicted RBP8.78□□□□□ -1
SEMA4D-223ENST00000540475 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
SEMA4D-223ENST00000540475 ZC2HC1AQ96GY0 325 aa8.78□□□□□ -1
SEMA4D-223ENST00000540475 MAP1LC3B2A6NCE7 125 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 ARPC5O15511 151 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 ASIPP42127 132 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 ZNF345Q14585 488 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 LAGE3Q14657 143 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 ZNF674Q2M3X9 581 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 FMC1Q96HJ9 113 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 MAP1LC3BQ9GZQ8 125 aa8.77□□□□□ -1.01
SEMA4D-223ENST00000540475 HERC1Q15751 4861 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 B4DEV8 164 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 LTAP01374 205 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 S100A4P26447 101 aaKnown RBP8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 KCNRGQ8N5I3 272 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 MBD3L1Q8WWY6 194 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 SAMD10Q9BYL1 202 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 Q9UF83 564 aa8.76□□□□□ -1.01
SEMA4D-223ENST00000540475 HMSDA8MTL9 139 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 SH2D1AO60880 128 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 ARMS2P0C7Q2 107 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 SEC11BP0C7V7 166 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 GCSHP23434 173 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 LGALSLQ3ZCW2 172 aaPredicted RBP8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 FAM162BQ5T6X4 162 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 STOML3Q8TAV4 291 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 JPT2Q9H910 190 aa8.75□□□□□ -1.01
SEMA4D-223ENST00000540475 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
SEMA4D-223ENST00000540475 H3BVH4 76 aa8.74□□□□□ -1.01
SEMA4D-223ENST00000540475 RHODO00212 210 aa8.74□□□□□ -1.01
SEMA4D-223ENST00000540475 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
SEMA4D-223ENST00000540475 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
SEMA4D-223ENST00000540475 MYCBP2O75592 4640 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 A0A087WWC5 75 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 Q8N814 137 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 OR11H4Q8NGC9 324 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 MLST8Q9BVC4 326 aa8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
SEMA4D-223ENST00000540475 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 SMLR1H3BR10 107 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 PSCAO43653 123 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 CXCL1P09341 107 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms