RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 RYR3Q15413 4870 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 IGHV4-4A0A075B6R2 117 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 RAB19A4D1S5 217 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 PGPEP1LA6NFU8 196 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 KRBOX1C9JBD0 128 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 C9JCJ5 164 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 ATP5G1P05496 136 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 RNASE3P12724 160 aaKnown RBP4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 LGALS9BQ3B8N2 356 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 DNLZQ5SXM8 178 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 C9orf85Q96MD7 179 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 SPXQ9BT56 116 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 EIF5A2Q9GZV4 153 aaKnown RBP4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 PARLQ9H300 379 aa4.92□□□□□ -1.62
LPCAT3-209ENST00000540060 VPS13DQ5THJ4 4388 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 TRGV2A0A075B6R0 118 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 B4DEV8 164 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 IGLL5B9A064 214 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 M0R036 132 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 ORM1P02763 201 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 SRP19P09132 144 aaKnown RBP4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 HTN3P15516 51 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 HOXA5P20719 270 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 ASIPP42127 132 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 TCTAP57738 103 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 IFITM2Q01629 132 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 RASL10AQ92737 203 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
LPCAT3-209ENST00000540060 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 H3BVH4 76 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 K7EN84 100 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 M0R2P5 195 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 CXCL1P09341 107 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 RPL19P84098 196 aaKnown RBP4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 SRSF3P84103 164 aaKnown RBP4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 PTH2Q96A98 100 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM210BQ96KR6 192 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 NDUFAF3Q9BU61 184 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 IL36BQ9NZH7 164 aa4.9□□□□□ -1.63
LPCAT3-209ENST00000540060 TRAV4A0A0B4J268 109 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 LCE6AA0A183 80 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 GRIFINA4D1Z8 144 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 C9JQL5 133 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 F5H768 121 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 ARMS2P0C7Q2 107 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 MED14OSP0DP75 135 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 S100A4P26447 101 aaKnown RBP4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 CEBPGP53567 150 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 RAB14P61106 215 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 OR5I1Q13606 314 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 C21orf62-AS1Q17RA5 79 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 POM121L12Q8N7R1 296 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 ZNF479Q96JC4 524 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 SMIM7Q9BQ49 75 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 SMDT1Q9H4I9 107 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 BIN3Q9NQY0 253 aa4.89□□□□□ -1.63
LPCAT3-209ENST00000540060 TRAV26-1A0A087WT03 109 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 ZNF727A8MUV8 499 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 SNAI2O43623 268 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 P01737 135 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 IGHV3-53P01767 116 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 FHL2Q14192 279 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 C15orf53Q8NAA6 179 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 LY96Q9Y6Y9 160 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
LPCAT3-209ENST00000540060 DNAH6Q9C0G6 4158 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 H3BNG1 76 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 RS1O15537 224 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 NXPH4O95158 308 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 OR5AL1P0C617 328 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 IGLC6P0CF74 106 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 PEA15Q15121 130 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM74A3Q4VXF1 159 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 CFAP126Q5VTH2 177 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 LGALS9CQ6DKI2 356 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM231DQ6ZW35 169 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 LINC01551Q86U37 167 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 OR4C5Q8NGB2 326 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 OR2D3Q8NGH3 330 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 OR10AG1Q8NH19 301 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 DAZAP1Q96EP5 407 aaKnown RBP4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 VSIG2Q96IQ7 327 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 SSBP4Q9BWG4 385 aaPredicted RBP4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 RNASE7Q9H1E1 156 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms