RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 RHOHQ15669 191 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 MIAQ16674 131 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-211ENST00000539921 GGNQ86UU5 652 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 DYNAPQ8N1N2 210 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 PATE1Q8WXA2 126 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 MRPL53Q96EL3 112 aaKnown RBP4.63□□□□□ -1.67
SNHG1-211ENST00000539921 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 DCTN5Q9BTE1 182 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 PROK2Q9HC23 129 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV3-15A0A0B4J1V0 119 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV3-43A0A0B4J1X8 118 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 I3L3M4 83 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 CXCL13O43927 109 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 DNAL4O96015 105 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV3-43DP0DP04 118 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 XCL1P47992 114 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 UBE2E1P51965 193 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 LINC00205P59089 165 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 TSPEAR-AS2P59090 65 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 BEAN1Q3B7T3 259 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 LYPD5Q6UWN5 251 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF826PQ6ZT77 177 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 KLHL30-AS1Q8NEE0 82 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 LITAFQ99732 161 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 DEFB126Q9BYW3 111 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 DAZ1Q9NQZ3 744 aaKnown RBP4.62□□□□□ -1.67
SNHG1-211ENST00000539921 XCL2Q9UBD3 114 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 LENEPQ9Y5L5 61 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 BRCA2P51587 3418 aa4.62□□□□□ -1.67
SNHG1-211ENST00000539921 CENPFP49454 3210 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 TMEM89A2RUT3 159 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 IBA57-AS1B1ANH7 110 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 SRRM5B3KS81 715 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 FAM27E3Q08E93 113 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 MLANAQ16655 118 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
SNHG1-211ENST00000539921 LINC01561Q8N1V8 128 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 IMMP1LQ96LU5 166 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 C8orf49Q96NF6 230 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
SNHG1-211ENST00000539921 NOTCH4Q99466 2003 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 RP1P56715 2156 aa4.61□□□□□ -1.67
SNHG1-211ENST00000539921 ARHGEF17Q96PE2 2063 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-211ENST00000539921 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 CGB1A6NKQ9 187 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 DEFB108AA8MXU0 73 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 ERC2-IT1O76042 136 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 NXPH4O95158 308 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 C17orf58Q2M2W7 97 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 C14orf178Q8N769 122 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-211ENST00000539921 NUP37Q8NFH4 326 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 CCL13Q99616 98 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 ABCA7Q8IZY2 2146 aa4.6□□□□□ -1.67
SNHG1-211ENST00000539921 TRAV8-3A0A0A6YYJ7 113 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV1-18A0A0C4DH31 117 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV7-4-1A0A0J9YVY3 117 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 LYRM9A8MSI8 78 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 IGLV3-19P01714 112 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 CCKP06307 115 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 LYZP61626 148 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 NSUN5P1Q3KNT7 163 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 GFRALQ6UXV0 394 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 RAI1Q7Z5J4 1906 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-211ENST00000539921 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
SNHG1-211ENST00000539921 MRPL36Q9P0J6 103 aaKnown RBP4.59□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV1-58A0A0C4DH39 117 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 GAS8-AS1O95177 125 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 TSHBP01222 138 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV1-17P01599 117 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 IGLV2-23P01705 113 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV1-16P04430 117 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 BAALC-AS2P0C853 105 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 GATA1P15976 413 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-211ENST00000539921 CDSNQ15517 529 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 C22orf34Q6ZV56 151 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 CLEC2BQ92478 149 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 EEF1AKMT3Q96AZ1 226 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 RNF5Q99942 180 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 GON4LQ3T8J9 2241 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 PRRC2BQ5JSZ5 2229 aaKnown RBP4.58□□□□□ -1.68
SNHG1-211ENST00000539921 RTTNQ86VV8 2226 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 ESPL1Q14674 2120 aa4.58□□□□□ -1.68
SNHG1-211ENST00000539921 TNRC18O15417 2968 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-211ENST00000539921 IGKV1D-17A0A075B6S4 117 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 FAM223BA6NKX1 122 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 H7C2G1 150 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 I3L2K1 104 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 VCYO14598 125 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 PRSS2P07478 247 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 RPL27AP46776 148 aaKnown RBP4.57□□□□□ -1.68
SNHG1-211ENST00000539921 POLR2KP53803 58 aaKnown RBP4.57□□□□□ -1.68
SNHG1-211ENST00000539921 PCOLCEQ15113 449 aa4.57□□□□□ -1.68
SNHG1-211ENST00000539921 SPANXN1Q5VSR9 72 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms