RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SCO2A0A1W2PP80 73 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
DDB1-216ENST00000539739 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 PARLQ9H300 379 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
DDB1-216ENST00000539739 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 LEPP41159 167 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 HINT1P49773 126 aaPredicted RBP11.31□□□□□ -0.6
DDB1-216ENST00000539739 FXYD7P58549 80 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 CKS1BP61024 79 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 UBE2G1P62253 170 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 TSPAN13O95857 204 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 COX19Q49B96 90 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
DDB1-216ENST00000539739 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 TRAV34A0A0B4J273 112 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 M0R2Z0 102 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 PRNTQ86SH4 94 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 Q8N976 141 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 OR5A1Q8NGJ0 315 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 Q8TAT8 98 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 C11orf52Q96A22 123 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 SMIM7Q9BQ49 75 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 XCL2Q9UBD3 114 aa11.3□□□□□ -0.6
DDB1-216ENST00000539739 J3QR89 54 aa11.29□□□□□ -0.6
DDB1-216ENST00000539739 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
DDB1-216ENST00000539739 SPANXA1Q9NS26 97 aa11.29□□□□□ -0.6
DDB1-216ENST00000539739 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
DDB1-216ENST00000539739 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 CRISP2P16562 243 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
DDB1-216ENST00000539739 ODF1Q14990 250 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 ADIRFQ15847 76 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
DDB1-216ENST00000539739 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.6
DDB1-216ENST00000539739 GPX1P07203 203 aa11.27□□□□□ -0.6
DDB1-216ENST00000539739 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.6
DDB1-216ENST00000539739 SBSPONQ8IVN8 264 aa11.27□□□□□ -0.6
DDB1-216ENST00000539739 B9D2Q9BPU9 175 aa11.27□□□□□ -0.6
DDB1-216ENST00000539739 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 INSP01308 110 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 AZU1P20160 251 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 OR10J3Q5JRS4 329 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 ASCL2Q99929 193 aa11.27□□□□□ -0.61
DDB1-216ENST00000539739 MEGF8Q7Z7M0 2845 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 KLLNB2CW77 178 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 Q86TA4 180 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
DDB1-216ENST00000539739 GAGE10A6NGK3 116 aa11.25□□□□□ -0.61
DDB1-216ENST00000539739 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
DDB1-216ENST00000539739 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
DDB1-216ENST00000539739 SEC11AP67812 179 aa11.25□□□□□ -0.61
DDB1-216ENST00000539739 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
DDB1-216ENST00000539739 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
DDB1-216ENST00000539739 ST20Q9HBF5 79 aa11.25□□□□□ -0.61
DDB1-216ENST00000539739 C7orf71A4D174 169 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 LTAP01374 205 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 BAGE2Q86Y30 109 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 CSNK1G2-AS1Q8NCQ2 148 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 RNF183Q96D59 192 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 TP53TG1Q9Y2A0 90 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 SPRY2O43597 315 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 MT-ND6P03923 174 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
DDB1-216ENST00000539739 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 NUPR1O60356 82 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 SERF1AO75920 110 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 GNG4P50150 75 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 HSD52Q0P140 79 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 TM2D3Q9BRN9 247 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
DDB1-216ENST00000539739 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 NHLRC4P0CG21 123 aaPredicted RBP11.22□□□□□ -0.61
DDB1-216ENST00000539739 KRTDAPP60985 99 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 CENPWQ5EE01 88 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms