RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 RTL8CO15255 209 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 PAX4O43316 350 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 ORM1P02763 201 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 RAB5CP51148 216 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 RPL19P84098 196 aaKnown RBP7.39□□□□□ -1.23
HMGA2-209ENST00000539662 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 ZNF506Q5JVG8 444 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 EIF5AL1Q6IS14 154 aaKnown RBP7.39□□□□□ -1.23
HMGA2-209ENST00000539662 MLST8Q9BVC4 326 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 HHLA3Q9XRX5 114 aa7.39□□□□□ -1.23
HMGA2-209ENST00000539662 TRAV4A0A0B4J268 109 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 TRGV4A0A0C4DH28 118 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 B4DEV8 164 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 H3BNG1 76 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 H3BVH4 76 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 IGLV2-8P01709 118 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 RPL35P42766 123 aaKnown RBP7.38□□□□□ -1.23
HMGA2-209ENST00000539662 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 CFAP126Q5VTH2 177 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 Q6ZSN1 163 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 OR4C5Q8NGB2 326 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 C11orf52Q96A22 123 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 TCEAL7Q9BRU2 100 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 KRTAP1-5Q9BYS1 174 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 PRO0255Q9UI72 69 aa7.38□□□□□ -1.23
HMGA2-209ENST00000539662 DNAH11Q96DT5 4516 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 K7EQD1 137 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 RS1O15537 224 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 ARMS2P0C7Q2 107 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 CCL18P55774 89 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 BAGE2Q86Y30 109 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 SAMD10Q9BYL1 202 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 Q9UF83 564 aa7.37□□□□□ -1.23
HMGA2-209ENST00000539662 TRBV20OR9-2A0A075B6H5 130 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 BCL2P10415 239 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 GYPEP15421 78 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
HMGA2-209ENST00000539662 ASIPP42127 132 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
HMGA2-209ENST00000539662 DMRTA1Q5VZB9 504 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 PRR27Q6MZM9 219 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 PCNPQ8WW12 178 aaKnown RBP7.36□□□□□ -1.23
HMGA2-209ENST00000539662 Q9H8V8 135 aa7.36□□□□□ -1.23
HMGA2-209ENST00000539662 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 NBDYA0A0U1RRE5 68 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
HMGA2-209ENST00000539662 CENPWQ5EE01 88 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 LYPD5Q6UWN5 251 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 SLC25A29Q8N8R3 303 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 PTH2Q96A98 100 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 SCRT2Q9NQ03 307 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 IL36BQ9NZH7 164 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 MRPS16Q9Y3D3 137 aaKnown RBP7.35□□□□□ -1.23
HMGA2-209ENST00000539662 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
HMGA2-209ENST00000539662 S100A9P06702 114 aaKnown RBP7.34□□□□□ -1.23
HMGA2-209ENST00000539662 FAM3BP58499 235 aaPredicted RBP7.34□□□□□ -1.23
HMGA2-209ENST00000539662 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
HMGA2-209ENST00000539662 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
HMGA2-209ENST00000539662 UPK3BQ9BT76 320 aa7.34□□□□□ -1.23
HMGA2-209ENST00000539662 PARLQ9H300 379 aa7.34□□□□□ -1.23
HMGA2-209ENST00000539662 MED9Q9NWA0 146 aa7.34□□□□□ -1.23
HMGA2-209ENST00000539662 TEX46H3BTG2 121 aa7.33□□□□□ -1.24
HMGA2-209ENST00000539662 GZMBP10144 247 aa7.33□□□□□ -1.24
HMGA2-209ENST00000539662 SLAQ13239 276 aa7.33□□□□□ -1.24
HMGA2-209ENST00000539662 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
HMGA2-209ENST00000539662 VAX2Q9UIW0 290 aa7.33□□□□□ -1.24
HMGA2-209ENST00000539662 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
HMGA2-209ENST00000539662 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 A0A087WWL8 130 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 M0R381 172 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 NXPH4O95158 308 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 IFNA1P01562 189 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 MGST1P10620 155 aaKnown RBP7.32□□□□□ -1.24
HMGA2-209ENST00000539662 SRIP30626 198 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 SSTP61278 116 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 NEGR1Q7Z3B1 354 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 C14orf178Q8N769 122 aaPredicted RBP7.32□□□□□ -1.24
HMGA2-209ENST00000539662 OR10AG1Q8NH19 301 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 TXNDC17Q9BRA2 123 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
HMGA2-209ENST00000539662 C19orf71A6NCJ1 209 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 RBFOX3A6NFN3 312 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 PDE6DO43924 150 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 CRYGDP07320 174 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 BLOC1S1P78537 153 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 WFDC10BQ8IUB3 73 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 SFRP2Q96HF1 295 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
HMGA2-209ENST00000539662 TRBV6-4A0A1B0GX49 114 aa7.3□□□□□ -1.24
HMGA2-209ENST00000539662 A8MWV9 139 aa7.3□□□□□ -1.24
HMGA2-209ENST00000539662 K7EN84 100 aa7.3□□□□□ -1.24
HMGA2-209ENST00000539662 GNG4P50150 75 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms