RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
UBE3B-210ENST00000539599 RNASE3P12724 160 aaKnown RBP10.59□□□□□ -0.71
UBE3B-210ENST00000539599 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
UBE3B-210ENST00000539599 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 A0A087WWL8 130 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 A0A0G2JLM5 398 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 GAGE10A6NGK3 116 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 DPM2O94777 84 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 SEC11AP67812 179 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 EPG5Q9HCE0 2579 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 MSMBP08118 114 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 MYOZ3Q8TDC0 251 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
UBE3B-210ENST00000539599 PRB1P04280 392 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 ASIPP42127 132 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
UBE3B-210ENST00000539599 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
UBE3B-210ENST00000539599 OCIAD2Q56VL3 154 aa10.56□□□□□ -0.72
UBE3B-210ENST00000539599 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
UBE3B-210ENST00000539599 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
UBE3B-210ENST00000539599 NHP2Q9NX24 153 aaKnown RBP10.56□□□□□ -0.72
UBE3B-210ENST00000539599 A6NDN8 102 aa10.55□□□□□ -0.72
UBE3B-210ENST00000539599 CRIP2P52943 208 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-210ENST00000539599 SRSF1Q07955 248 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBE3B-210ENST00000539599 DEFB112Q30KQ8 113 aa10.55□□□□□ -0.72
UBE3B-210ENST00000539599 IGHV4-4A0A075B6R2 117 aa10.55□□□□□ -0.72
UBE3B-210ENST00000539599 H3BRM9 83 aa10.55□□□□□ -0.72
UBE3B-210ENST00000539599 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
UBE3B-210ENST00000539599 OVOL1O14753 267 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 FAM74A4Q5TZK3 123 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 CHD6Q8TD26 2715 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 A0A087WX48 190 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-210ENST00000539599 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 UFSP1Q6NVU6 142 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 DPH3P1Q9H4G8 78 aa10.54□□□□□ -0.72
UBE3B-210ENST00000539599 ATP5LO75964 103 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 PRM2P04554 102 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 PPP1R14DQ9NXH3 145 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 SMPXQ9UHP9 88 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
UBE3B-210ENST00000539599 CD7P09564 240 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
UBE3B-210ENST00000539599 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 MTURNQ8N3F0 131 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
UBE3B-210ENST00000539599 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 VPS25Q9BRG1 176 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 SPCS1Q9Y6A9 102 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 CCDC168Q8NDH2 2452 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
UBE3B-210ENST00000539599 WNK1Q9H4A3 2382 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 F5H697 171 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 SIVA1O15304 175 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 CFHR3Q02985 330 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 CHTOPQ9Y3Y2 248 aaKnown RBP10.51□□□□□ -0.73
UBE3B-210ENST00000539599 K7EP34 96 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
UBE3B-210ENST00000539599 HTN1P15515 57 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 CDKN1BP46527 198 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 LINC00315P59091 139 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 DEFB136Q30KP8 78 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 SAMD5Q5TGI4 173 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
UBE3B-210ENST00000539599 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 SUMO4Q6EEV6 95 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 F8VRH5 84 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 CEND1Q8N111 149 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 DUX3Q96PT4 197 aa10.49□□□□□ -0.73
UBE3B-210ENST00000539599 OPRPNQ99935 248 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-210ENST00000539599 TGFAP01135 160 aa10.48□□□□□ -0.73
UBE3B-210ENST00000539599 TSHBP01222 138 aa10.48□□□□□ -0.73
UBE3B-210ENST00000539599 PSMB8P28062 276 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms