RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PTH2Q96A98 100 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 PRADC1Q9BSG0 188 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 ARL2-SNX15V9GYD0 113 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 PEX7O00628 323 aa15.03■□□□□ -0
SCARB1-206ENST00000539320 CRYGDP07320 174 aa15.03■□□□□ -0
SCARB1-206ENST00000539320 Q86TA4 180 aa15.03■□□□□ -0
SCARB1-206ENST00000539320 LINC00479Q96M42 142 aa15.03■□□□□ -0
SCARB1-206ENST00000539320 IGHV3-73A0A0B4J1V6 119 aa15.02■□□□□ -0
SCARB1-206ENST00000539320 TRBV6-4A0A1B0GX49 114 aa15.02■□□□□ -0
SCARB1-206ENST00000539320 PGPEP1LA6NFU8 196 aa15.02■□□□□ -0
SCARB1-206ENST00000539320 PFDN1O60925 122 aa15.02■□□□□ -0
SCARB1-206ENST00000539320 FGF8P55075 233 aaPredicted RBP15.02■□□□□ -0
SCARB1-206ENST00000539320 CDPF1Q6NVV7 123 aa15.02■□□□□ -0
SCARB1-206ENST00000539320 A0A087WTM6 91 aa15.01□□□□□ -0.01
SCARB1-206ENST00000539320 FAM74A7A6NL05 159 aa15.01□□□□□ -0.01
SCARB1-206ENST00000539320 ARPC5O15511 151 aa15.01□□□□□ -0.01
SCARB1-206ENST00000539320 NKX6-2Q9C056 277 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-206ENST00000539320 PGPEP1Q9NXJ5 209 aa15.01□□□□□ -0.01
SCARB1-206ENST00000539320 IGKV3D-20A0A0C4DH25 116 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 IGHV3-38A0A0C4DH36 116 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 MAP1LC3B2A6NCE7 125 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 S100A4P26447 101 aaKnown RBP15□□□□□ -0.01
SCARB1-206ENST00000539320 Q8N1X5 172 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 HIST1H2BAQ96A08 127 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 MAP1LC3BQ9GZQ8 125 aa15□□□□□ -0.01
SCARB1-206ENST00000539320 MGST1P10620 155 aaKnown RBP14.99□□□□□ -0.01
SCARB1-206ENST00000539320 FUSP35637 526 aaKnown RBP eCLIP14.99□□□□□ -0.016e-6■■■□□ 17.3
SCARB1-206ENST00000539320 ASIPP42127 132 aa14.99□□□□□ -0.01
SCARB1-206ENST00000539320 LINC01556Q5JQF7 62 aa14.99□□□□□ -0.01
SCARB1-206ENST00000539320 CYTL1Q9NRR1 136 aa14.99□□□□□ -0.01
SCARB1-206ENST00000539320 TRAV8-6A0A0B4J262 113 aa14.98□□□□□ -0.01
SCARB1-206ENST00000539320 FABP5P3A8MUU1 101 aa14.98□□□□□ -0.01
SCARB1-206ENST00000539320 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
SCARB1-206ENST00000539320 TCTE3Q8IZS6 198 aa14.98□□□□□ -0.01
SCARB1-206ENST00000539320 PARLQ9H300 379 aa14.98□□□□□ -0.01
SCARB1-206ENST00000539320 BOLA1Q9Y3E2 137 aa14.97□□□□□ -0.01
SCARB1-206ENST00000539320 A8MWV9 139 aa14.96□□□□□ -0.01
SCARB1-206ENST00000539320 PIK3CD-AS1Q5SR53 167 aa14.96□□□□□ -0.01
SCARB1-206ENST00000539320 LELP1Q5T871 98 aa14.96□□□□□ -0.01
SCARB1-206ENST00000539320 SCRT2Q9NQ03 307 aa14.96□□□□□ -0.01
SCARB1-206ENST00000539320 B4DEV8 164 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 H3BVH4 76 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 LGALSLQ3ZCW2 172 aaPredicted RBP14.95□□□□□ -0.02
SCARB1-206ENST00000539320 ZFP2Q6ZN57 461 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 ATP6V0E2Q8NHE4 81 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 ZC2HC1AQ96GY0 325 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 IL36BQ9NZH7 164 aa14.95□□□□□ -0.02
SCARB1-206ENST00000539320 UBE2G1P62253 170 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 OR11H4Q8NGC9 324 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 STOML3Q8TAV4 291 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 FMC1Q96HJ9 113 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 TCEAL7Q9BRU2 100 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 GTSF1LQ9H1H1 148 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 ZFP30Q9Y2G7 519 aa14.94□□□□□ -0.02
SCARB1-206ENST00000539320 SH2D1AO60880 128 aa14.93□□□□□ -0.02
SCARB1-206ENST00000539320 Q6ZSN1 163 aa14.93□□□□□ -0.02
SCARB1-206ENST00000539320 COX8CQ7Z4L0 72 aa14.93□□□□□ -0.02
SCARB1-206ENST00000539320 IBA57-AS1B1ANH7 110 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 M0R036 132 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 PSCAO43653 123 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 C1QBP02746 253 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 LINC00694P0DN24 101 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 FHITP49789 147 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 CRIP1P50238 77 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 ZNF345Q14585 488 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 FAM162BQ5T6X4 162 aa14.92□□□□□ -0.02
SCARB1-206ENST00000539320 TRBV6-1A0A0K0K1D8 114 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 KRBOX1C9JBD0 128 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 IGHV3-30P01768 117 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 IGHV3-33P01772 117 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 IGHV3-30-3P0DP02 117 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 IGHV3-30-5P0DP03 117 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 AKR1C3P42330 323 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 DNLZQ5SXM8 178 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 CST9LP1Q5W188 147 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 KCNRGQ8N5I3 272 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 SYT8Q8NBV8 401 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 JPT2Q9H910 190 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 Q9HAA7 133 aa14.91□□□□□ -0.02
SCARB1-206ENST00000539320 GAGE12JA6NER3 117 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 RHODO00212 210 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 GAGE1Q13065 139 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 GAGE4Q13068 117 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 GAGE5Q13069 117 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 UFSP1Q6NVU6 142 aa14.9□□□□□ -0.02
SCARB1-206ENST00000539320 FAT1Q14517 4588 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 GRIFINA4D1Z8 144 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 LTAP01374 205 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 ARMS2P0C7Q2 107 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 NKX2-5P52952 324 aaPredicted RBP14.89□□□□□ -0.03
SCARB1-206ENST00000539320 KRTAP10-1P60331 282 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 DMRTA1Q5VZB9 504 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 SAMD10Q9BYL1 202 aa14.89□□□□□ -0.03
SCARB1-206ENST00000539320 ZNF674Q2M3X9 581 aa14.88□□□□□ -0.03
SCARB1-206ENST00000539320 LINC01559Q495D7 138 aa14.88□□□□□ -0.03
SCARB1-206ENST00000539320 SEC11BP0C7V7 166 aa14.87□□□□□ -0.03
SCARB1-206ENST00000539320 LAGE3Q14657 143 aa14.87□□□□□ -0.03
SCARB1-206ENST00000539320 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
SCARB1-206ENST00000539320 FAM213BQ8TBF2 198 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms