RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 YPEL1O60688 119 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IGHV3-33P01772 117 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 KRTAP2-3P0C7H8 128 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 BCL2P10415 239 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CRYGAP11844 174 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 NCALDP61601 193 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 RPS25P62851 125 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM155Q4W5P6 130 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 NDUFA11Q86Y39 141 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 LINC00471Q8N535 108 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CNEP1R1Q8N9A8 125 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 OR5A1Q8NGJ0 315 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 OR8D4Q8NGM9 314 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 H1FXQ92522 213 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 BORCS8Q96FH0 119 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 BTF3L4Q96K17 158 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 KRTAP2-4Q9BYR9 128 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 FAM96AQ9H5X1 160 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CALML5Q9NZT1 146 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SPG11Q96JI7 2443 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 HEATR1Q9H583 2144 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 KALRNO60229 2985 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 DNAH9Q9NYC9 4486 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 POLEQ07864 2286 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TECTAO75443 2155 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MDC1Q14676 2089 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PCDH15Q96QU1 1955 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TENM3Q9P273 2699 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MAP1BP46821 2468 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IGHV1-58A0A0C4DH39 117 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 A0A0G2JMM0 328 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 A0A1W2PPB8 328 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 A0A1W2PRS3 328 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 KIR3DP1A8MWS1 328 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 B4DEV8 164 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 BANF1O75531 89 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IFNA4P05014 189 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 UBBP0CG47 229 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SMIM17P0DL12 118 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PIGPP57054 158 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TSPEAR-AS2P59090 65 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 FABP9Q0Z7S8 132 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PDE6HQ13956 83 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM91Q6ZNR0 172 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 OR4S1Q8NGB4 309 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 WFDC5Q8TCV5 224 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 NAA38Q9BRA0 125 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 OR2H1Q9GZK4 316 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 ASF1BQ9NVP2 202 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MRPL16Q9NX20 251 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 HSPE1-MOB4S4R3N1 261 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MUC6Q6W4X9 2439 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 LRP1Q07954 4544 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 E9PCH4 1651 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 DYNC1H1Q14204 4646 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 FAM236AA0A1B0GUQ0 79 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 FAM236BA0A1B0GV22 79 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 COX7A2LO14548 114 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 RPL22P35268 128 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 AKR1D1P51857 326 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TMBIM6P55061 237 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TCTAP57738 103 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 Q0VG73 95 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 EIF3IQ13347 325 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 OR10AG1Q8NH19 301 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SKA2Q8WVK7 121 aaPredicted RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ARL11Q969Q4 196 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 DCUN1D1Q96GG9 259 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 HHLA3Q9XRX5 114 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TOP2AP11388 1531 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SCAPERQ9BY12 1400 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 MYOFQ9NZM1 2061 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 IGKV1D-17A0A075B6S4 117 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TLCD2A6NGC4 264 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ARL5CA6NH57 179 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 C17orf112F2Z3M2 114 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TSTD3H0UI37 97 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TRGC2P03986 189 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 CD14P08571 375 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF25P17030 456 aaPredicted RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 HLA-DMBP28068 263 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ETV6P41212 452 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 CDK6Q00534 326 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TPRXLQ17RH7 258 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 AKR1C8PQ5T2L2 129 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 Q6AWC8 147 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TEX261Q6UWH6 196 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SNX29P2Q8IUI4 249 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 PDZD9Q8IXQ8 264 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 MMGT1Q8N4V1 131 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SPACA4Q8TDM5 124 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 LPAR5Q9H1C0 372 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SCN3BQ9NY72 215 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 PXMP4Q9Y6I8 212 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TET1Q8NFU7 2136 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ZFYVE26Q68DK2 2539 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ANKRD36BQ8N2N9 1353 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TRGV10A0A0A0MS01 117 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms