RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TIRAPP58753 221 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 ZFP30Q9Y2G7 519 aa7.92□□□□□ -1.14
RTN3-209ENST00000538995 RS1O15537 224 aa7.91□□□□□ -1.14
RTN3-209ENST00000538995 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
RTN3-209ENST00000538995 ASIPP42127 132 aa7.91□□□□□ -1.14
RTN3-209ENST00000538995 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
RTN3-209ENST00000538995 MBD3L1Q8WWY6 194 aa7.91□□□□□ -1.14
RTN3-209ENST00000538995 ZNF471Q9BX82 626 aaPredicted RBP7.91□□□□□ -1.14
RTN3-209ENST00000538995 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 TRBV6-4A0A1B0GX49 114 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 S100A4P26447 101 aaKnown RBP7.9□□□□□ -1.14
RTN3-209ENST00000538995 LINC00315P59091 139 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 UBE2G1P62253 170 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 RHOHQ15669 191 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 ZNF506Q5JVG8 444 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 DNLZQ5SXM8 178 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 CST9LP1Q5W188 147 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 SFT2D1Q8WV19 159 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 PRADC1Q9BSG0 188 aa7.9□□□□□ -1.14
RTN3-209ENST00000538995 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 A8MWV9 139 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 B4DEV8 164 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 LTAP01374 205 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 MGST1P10620 155 aaKnown RBP7.89□□□□□ -1.15
RTN3-209ENST00000538995 TPT1P13693 172 aaKnown RBP7.89□□□□□ -1.15
RTN3-209ENST00000538995 AKR1C3P42330 323 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 LGALSLQ3ZCW2 172 aaPredicted RBP7.89□□□□□ -1.15
RTN3-209ENST00000538995 FAM162BQ5T6X4 162 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 ZNF575Q86XF7 245 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 SLC25A29Q8N8R3 303 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 ZC2HC1AQ96GY0 325 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 IL36BQ9NZH7 164 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
RTN3-209ENST00000538995 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 C16orf90A8MZG2 172 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 PAGE4O60829 102 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 PFDN1O60925 122 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
RTN3-209ENST00000538995 DNAH10OSP0CZ25 163 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 ZFP2Q6ZN57 461 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
RTN3-209ENST00000538995 TMUB2Q71RG4 321 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 NFE4Q86UQ8 179 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 NHLRC2Q8NBF2 726 aa7.88□□□□□ -1.15
RTN3-209ENST00000538995 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 KRBOX1C9JBD0 128 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 SH2D1AO60880 128 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 EVI2AP22794 236 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 CRIP1P50238 77 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 ZNF674Q2M3X9 581 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 LINC01559Q495D7 138 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 EIF5AL1Q6IS14 154 aaKnown RBP7.87□□□□□ -1.15
RTN3-209ENST00000538995 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 C10orf126Q8N4M7 172 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 SYT8Q8NBV8 401 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 PARLQ9H300 379 aa7.87□□□□□ -1.15
RTN3-209ENST00000538995 RHODO00212 210 aa7.86□□□□□ -1.15
RTN3-209ENST00000538995 RAB5CP51148 216 aa7.86□□□□□ -1.15
RTN3-209ENST00000538995 IGHV3-73A0A0B4J1V6 119 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 H3BVH4 76 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 M0R036 132 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 UFSP1Q6NVU6 142 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 SPATA12Q7Z6I5 190 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 SCRT2Q9NQ03 307 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 MANBALQ9NQG1 85 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
RTN3-209ENST00000538995 TRAV8-6A0A0B4J262 113 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 IGHV3-38A0A0C4DH36 116 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 A0A1B0GV50 99 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 CRYGDP07320 174 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 CXCL1P09341 107 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 ERVFC1-1P60608 527 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 LINC01556Q5JQF7 62 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 LELP1Q5T871 98 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 GTSF1LQ9H1H1 148 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 HSPG2P98160 4391 aa7.84□□□□□ -1.15
RTN3-209ENST00000538995 DNAH5Q8TE73 4624 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 EREGO14944 169 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 ZFP82Q8N141 532 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 ATP6V0E2Q8NHE4 81 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 PHLDA3Q9Y5J5 127 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
RTN3-209ENST00000538995 GRIFINA4D1Z8 144 aa7.82□□□□□ -1.16
RTN3-209ENST00000538995 C1QBP02746 253 aa7.82□□□□□ -1.16
RTN3-209ENST00000538995 SULT1A2P50226 295 aa7.82□□□□□ -1.16
RTN3-209ENST00000538995 OR10J3Q5JRS4 329 aa7.82□□□□□ -1.16
RTN3-209ENST00000538995 Q6ZSN1 163 aa7.82□□□□□ -1.16
RTN3-209ENST00000538995 BAGE2Q86Y30 109 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms