RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 PACRGQ96M98 296 aaPredicted RBP15.44■□□□□ 0.06
PDXDC1-205ENST00000535621 CLUHP3Q96NS8 147 aa15.43■□□□□ 0.06
PDXDC1-205ENST00000535621 C3orf56Q8N813 242 aa15.43■□□□□ 0.06
PDXDC1-205ENST00000535621 ZNF747Q9BV97 191 aa15.43■□□□□ 0.06
PDXDC1-205ENST00000535621 CD7P09564 240 aa15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 RBMY1A1P0DJD3 496 aaKnown RBP15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 RBMY1CP0DJD4 496 aa15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 RBMY1FQ15415 496 aaKnown RBP15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 BEAN1Q3B7T3 259 aa15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 MRPL51Q4U2R6 128 aaKnown RBP15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 LINC00518Q8N0U6 118 aa15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 TMEM18Q96B42 140 aa15.42■□□□□ 0.06
PDXDC1-205ENST00000535621 SPRY2O43597 315 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 RNF185Q96GF1 192 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 PHLDA3Q9Y5J5 127 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 U3KQK5 164 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 IGHV1OR15-1A0A075B7D0 117 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 EVI2AP22794 236 aa15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 CMC4P56277 68 aaPredicted RBP15.41■□□□□ 0.06
PDXDC1-205ENST00000535621 D6R8Y8 96 aa15.4■□□□□ 0.06
PDXDC1-205ENST00000535621 RAB4AP20338 218 aa15.4■□□□□ 0.06
PDXDC1-205ENST00000535621 C12orf54Q6X4T0 127 aa15.4■□□□□ 0.06
PDXDC1-205ENST00000535621 FAM110AQ9BQ89 295 aa15.4■□□□□ 0.06
PDXDC1-205ENST00000535621 STHQ8IWL8 128 aa15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 Q8N1Y9 231 aa15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 TMEM158Q8WZ71 300 aa15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 MUC4Q99102 2169 aa15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 M0R381 172 aa15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 TRPT1Q86TN4 253 aaKnown RBP15.39■□□□□ 0.05
PDXDC1-205ENST00000535621 IGHV3-16A0A0C4DH30 117 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 ORMDL3Q8N138 153 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 URB1-AS1Q96HZ7 61 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 C19orf73Q9NVV2 129 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 SMIM6P0DI80 62 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 SMIM15Q7Z3B0 74 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 MDFICQ9P1T7 246 aa15.38■□□□□ 0.05
PDXDC1-205ENST00000535621 CMYA5Q8N3K9 4069 aa15.37■□□□□ 0.05
PDXDC1-205ENST00000535621 NXPH4O95158 308 aa15.37■□□□□ 0.05
PDXDC1-205ENST00000535621 NIT1Q86X76 327 aa15.37■□□□□ 0.05
PDXDC1-205ENST00000535621 CKS2P33552 79 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 C9orf85Q96MD7 179 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 PRELID3AQ96N28 172 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 INSL3P51460 131 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 C12orf57Q99622 126 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 SAMD10Q9BYL1 202 aa15.36■□□□□ 0.05
PDXDC1-205ENST00000535621 PKD1L1Q8TDX9 2849 aa15.35■□□□□ 0.05
PDXDC1-205ENST00000535621 SMKR1H3BMG3 65 aa15.35■□□□□ 0.05
PDXDC1-205ENST00000535621 PYY3Q5JQD4 70 aa15.35■□□□□ 0.05
PDXDC1-205ENST00000535621 RNASEKQ6P5S7 137 aaKnown RBP15.35■□□□□ 0.05
PDXDC1-205ENST00000535621 WFDC10AQ9H1F0 79 aa15.35■□□□□ 0.05
PDXDC1-205ENST00000535621 PPBPP02775 128 aa15.34■□□□□ 0.05
PDXDC1-205ENST00000535621 NCR2O95944 276 aa15.34■□□□□ 0.05
PDXDC1-205ENST00000535621 IGLL1P15814 213 aa15.34■□□□□ 0.05
PDXDC1-205ENST00000535621 TRGV11A0A075B6L2 103 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 GAS8-AS1O95177 125 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 INSP01308 110 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 LINC00614P0C842 121 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 AMTP48728 403 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 C9orf66Q5T8R8 295 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 SHISA2Q6UWI4 295 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 FAM19A2Q8N3H0 131 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 C20orf144Q9BQM9 153 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 CBY3A6NI87 242 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 HSBP1O75506 76 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 PMCHP20382 165 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 CHCHD1Q96BP2 118 aaKnown RBP15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 MDFIQ99750 246 aa15.33■□□□□ 0.04
PDXDC1-205ENST00000535621 NPYP01303 97 aa15.32■□□□□ 0.04
PDXDC1-205ENST00000535621 C14orf178Q8N769 122 aaPredicted RBP15.32■□□□□ 0.04
PDXDC1-205ENST00000535621 XCL2Q9UBD3 114 aa15.32■□□□□ 0.04
PDXDC1-205ENST00000535621 HTN1P15515 57 aa15.31■□□□□ 0.04
PDXDC1-205ENST00000535621 NUTF2P61970 127 aaKnown RBP15.31■□□□□ 0.04
PDXDC1-205ENST00000535621 AP1S3Q96PC3 154 aa15.31■□□□□ 0.04
PDXDC1-205ENST00000535621 LINC00467Q9BRT7 94 aa15.31■□□□□ 0.04
PDXDC1-205ENST00000535621 DPH3P1Q9H4G8 78 aa15.31■□□□□ 0.04
PDXDC1-205ENST00000535621 Q6ZWC4 215 aa15.3■□□□□ 0.04
PDXDC1-205ENST00000535621 WFDC9Q8NEX5 89 aa15.3■□□□□ 0.04
PDXDC1-205ENST00000535621 LAMTOR2Q9Y2Q5 125 aa15.3■□□□□ 0.04
PDXDC1-205ENST00000535621 ANK2Q01484 3957 aa15.3■□□□□ 0.04
PDXDC1-205ENST00000535621 PRM2P04554 102 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 LINC01587Q99440 93 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 TRAV26-2A0A0B4J265 109 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 GATA1P15976 413 aaPredicted RBP15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 IFI27P40305 119 aaPredicted RBP15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 JOSD1Q15040 202 aaPredicted RBP15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 LURAP1LQ8IV03 231 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 PRSS3P2Q8NHM4 247 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
PDXDC1-205ENST00000535621 LOC389332A0A1B0GUA5 103 aa15.28■□□□□ 0.04
PDXDC1-205ENST00000535621 TNFRSF6BO95407 300 aa15.28■□□□□ 0.04
PDXDC1-205ENST00000535621 C1orf158Q8N1D5 194 aa15.27■□□□□ 0.04
PDXDC1-205ENST00000535621 MRAP2Q96G30 205 aa15.27■□□□□ 0.04
PDXDC1-205ENST00000535621 JPT2Q9H910 190 aa15.27■□□□□ 0.04
PDXDC1-205ENST00000535621 GIG44P09565 113 aaPredicted RBP15.27■□□□□ 0.03
PDXDC1-205ENST00000535621 SYT8Q8NBV8 401 aa15.27■□□□□ 0.03
PDXDC1-205ENST00000535621 AP5S1Q9NUS5 200 aa15.27■□□□□ 0.03
PDXDC1-205ENST00000535621 IGHV1-24A0A0C4DH33 117 aa15.26■□□□□ 0.03
PDXDC1-205ENST00000535621 LINC00315P59091 139 aa15.26■□□□□ 0.03
PDXDC1-205ENST00000535621 PMCHL1Q16048 86 aa15.26■□□□□ 0.03
PDXDC1-205ENST00000535621 NRACQ8N912 160 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms