RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CST9LP1Q5W188 147 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 LINC00479Q96M42 142 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 C9orf85Q96MD7 179 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 CYTL1Q9NRR1 136 aa8.13□□□□□ -1.11
KNTC1-208ENST00000535410 G3V3Q6 166 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 CFAP126Q5VTH2 177 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 ZFP2Q6ZN57 461 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 SPATA12Q7Z6I5 190 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 ZNF575Q86XF7 245 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
KNTC1-208ENST00000535410 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 B4DEV8 164 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 PFDN1O60925 122 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
KNTC1-208ENST00000535410 LGALSLQ3ZCW2 172 aaPredicted RBP8.11□□□□□ -1.11
KNTC1-208ENST00000535410 ZNF506Q5JVG8 444 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 EIF5AL1Q6IS14 154 aaKnown RBP8.11□□□□□ -1.11
KNTC1-208ENST00000535410 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 Q86TA4 180 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 SFT2D1Q8WV19 159 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
KNTC1-208ENST00000535410 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 IL36BQ9NZH7 164 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 MSRB1Q9NZV6 116 aa8.11□□□□□ -1.11
KNTC1-208ENST00000535410 PGPEP1LA6NFU8 196 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 AKR1C3P42330 323 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 FAM213BQ8TBF2 198 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
KNTC1-208ENST00000535410 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 SMLR1H3BR10 107 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 TEX46H3BTG2 121 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 RHODO00212 210 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 BCL2L11O43521 198 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 CRYGDP07320 174 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
KNTC1-208ENST00000535410 DNLZQ5SXM8 178 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 ATP6V0E2Q8NHE4 81 aa8.09□□□□□ -1.11
KNTC1-208ENST00000535410 IGHV3-73A0A0B4J1V6 119 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 PAGE4O60829 102 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 LTAP01374 205 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 RAB5CP51148 216 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 OR10J3Q5JRS4 329 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 OR11H4Q8NGC9 324 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 PHLDA3Q9Y5J5 127 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
KNTC1-208ENST00000535410 A0A087WWC5 75 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 KRBOX1C9JBD0 128 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 SH2D1AO60880 128 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 ARMS2P0C7Q2 107 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 ZNF674Q2M3X9 581 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 LELP1Q5T871 98 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
KNTC1-208ENST00000535410 ZC2HC1AQ96GY0 325 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 PARLQ9H300 379 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
KNTC1-208ENST00000535410 HERC2O95714 4834 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 H3BVH4 76 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 M0R036 132 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 PSCAO43653 123 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 TMUB2Q71RG4 321 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 ZFP82Q8N141 532 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
KNTC1-208ENST00000535410 CRIP1P50238 77 aa8.05□□□□□ -1.12
KNTC1-208ENST00000535410 BAGE2Q86Y30 109 aa8.05□□□□□ -1.12
KNTC1-208ENST00000535410 MANBALQ9NQG1 85 aa8.05□□□□□ -1.12
KNTC1-208ENST00000535410 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 IBA57-AS1B1ANH7 110 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 TOR2AQ5JU69 321 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
KNTC1-208ENST00000535410 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 TM2D2Q9BX73 214 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
KNTC1-208ENST00000535410 A0A087WTM6 91 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 TMSB15BA0A087X1C1 80 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 TRAV1-1A0A0B4J248 108 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 A0A1B0GV50 99 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 GAGE12JA6NER3 117 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 M0R381 172 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 CXCL1P09341 107 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 KRTAP10-2P60368 255 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 GAGE1Q13065 139 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 GAGE4Q13068 117 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 GAGE5Q13069 117 aa8.03□□□□□ -1.12
KNTC1-208ENST00000535410 LAGE3Q14657 143 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms