RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
MCF2L-232ENST00000535094 Q8N9W7 124 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 DPH3P1Q9H4G8 78 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 CENPEQ02224 2701 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 TRAV2A0A0B4J234 112 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 IGHG4P01861 327 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 ZFP2Q6ZN57 461 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 E9PLD3 99 aa12.2□□□□□ -0.46
MCF2L-232ENST00000535094 DUSP14O95147 198 aaKnown RBP12.2□□□□□ -0.46
MCF2L-232ENST00000535094 M0R1W7 72 aa12.19□□□□□ -0.46
MCF2L-232ENST00000535094 OVOL3O00110 214 aa12.19□□□□□ -0.46
MCF2L-232ENST00000535094 JPT2Q9H910 190 aa12.19□□□□□ -0.46
MCF2L-232ENST00000535094 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
MCF2L-232ENST00000535094 SVEP1Q4LDE5 3571 aa12.19□□□□□ -0.46
MCF2L-232ENST00000535094 MYO18BQ8IUG5 2567 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
MCF2L-232ENST00000535094 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-232ENST00000535094 PLEKHB2Q96CS7 222 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 TM2D2Q9BX73 214 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 ATP6V0BQ99437 205 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 NPC2P61916 151 aa12.18□□□□□ -0.46
MCF2L-232ENST00000535094 LYRM7Q5U5X0 104 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 IGHV4-39P01824 125 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 PRR9Q5T870 116 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
MCF2L-232ENST00000535094 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 MSRB2Q9Y3D2 182 aa12.17□□□□□ -0.46
MCF2L-232ENST00000535094 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
MCF2L-232ENST00000535094 CCDC140Q96MF4 163 aa12.16□□□□□ -0.46
MCF2L-232ENST00000535094 NRACQ8N912 160 aa12.16□□□□□ -0.46
MCF2L-232ENST00000535094 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
MCF2L-232ENST00000535094 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.46
MCF2L-232ENST00000535094 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.46
MCF2L-232ENST00000535094 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
MCF2L-232ENST00000535094 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
MCF2L-232ENST00000535094 CDSNQ15517 529 aa12.15□□□□□ -0.46
MCF2L-232ENST00000535094 BAALCQ8WXS3 180 aa12.15□□□□□ -0.47
MCF2L-232ENST00000535094 MRAP2Q96G30 205 aa12.15□□□□□ -0.47
MCF2L-232ENST00000535094 A8MWV9 139 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 ZNF688P0C7X2 276 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 TRAV12-2A0A075B6T6 113 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 KHDC1LQ5JSQ8 128 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 MINOS1Q5TGZ0 78 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 C9JAW5 83 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 RASL10AQ92737 203 aa12.14□□□□□ -0.47
MCF2L-232ENST00000535094 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 C9orf139Q6ZV77 190 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
MCF2L-232ENST00000535094 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
MCF2L-232ENST00000535094 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 C11orf86A6NJI1 115 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 TAL2Q16559 108 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
MCF2L-232ENST00000535094 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
MCF2L-232ENST00000535094 ZFYVE26Q68DK2 2539 aa12.12□□□□□ -0.47
MCF2L-232ENST00000535094 TRBV7-1A0A0A6YYK4 115 aa12.12□□□□□ -0.47
MCF2L-232ENST00000535094 TRAV26-1A0A087WT03 109 aa12.12□□□□□ -0.47
MCF2L-232ENST00000535094 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
MCF2L-232ENST00000535094 DCHS2Q6V1P9 2916 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 NPFFO15130 113 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 LY6DQ14210 128 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-232ENST00000535094 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 SDHAF1A6NFY7 115 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 FOXI1Q12951 378 aa12.11□□□□□ -0.47
MCF2L-232ENST00000535094 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
MCF2L-232ENST00000535094 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
MCF2L-232ENST00000535094 MT-ATP8P03928 68 aa12.1□□□□□ -0.47
MCF2L-232ENST00000535094 KLK9Q9UKQ9 250 aa12.1□□□□□ -0.47
MCF2L-232ENST00000535094 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 DUX5Q96PT3 197 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 ANAPC13Q9BS18 74 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 SPXQ9BT56 116 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 CLPSL1A2RUU4 121 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 OVOL1O14753 267 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 ZNF48Q96MX3 618 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-232ENST00000535094 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
MCF2L-232ENST00000535094 TSPAN13O95857 204 aa12.08□□□□□ -0.47
MCF2L-232ENST00000535094 UBE2E1P51965 193 aa12.08□□□□□ -0.47
MCF2L-232ENST00000535094 TOMM6Q96B49 74 aa12.08□□□□□ -0.47
MCF2L-232ENST00000535094 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
MCF2L-232ENST00000535094 H3BUX3 64 aa12.08□□□□□ -0.48
MCF2L-232ENST00000535094 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
MCF2L-232ENST00000535094 CENPVL3A0A0U1RRI6 287 aa12.07□□□□□ -0.48
MCF2L-232ENST00000535094 PMVKQ15126 192 aa12.07□□□□□ -0.48
MCF2L-232ENST00000535094 C9orf47Q6ZRZ4 202 aa12.07□□□□□ -0.48
MCF2L-232ENST00000535094 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
MCF2L-232ENST00000535094 VCYO14598 125 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms