RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FKBP1CQ5VVH2 108 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 FAM9CQ8IZT9 166 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 CLDN22Q8N7P3 220 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 OR5A2Q8NGI9 324 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 USE1Q9NZ43 259 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 VPS29Q9UBQ0 182 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 CSMD2Q7Z408 3487 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 CENPEQ02224 2701 aa-1.28□□□□□ -2.61
COPB1-212ENST00000534771 TSC2P49815 1807 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 CEP290O15078 2479 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 ARAP1Q96P48 1450 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 RTL9Q8NET4 1388 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 FXYD6-FXYD2A0A087WZ82 144 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 TRBV10-3A0A0K0K1G6 114 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 C5orf58C9J3I9 102 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 CDC42EP2O14613 210 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 BANF1O75531 89 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 TNFP01375 233 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 MT-ND6P03923 174 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 TPM1P09493 284 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 POU6F1Q14863 301 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 UNQ5815/PRO19632Q6UWF5 114 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 TRAPPC5Q8IUR0 188 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 OTUD6BQ8N6M0 293 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 PTH2Q96A98 100 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 TRIM4Q9C037 500 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 PARVBQ9HBI1 364 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 BATF3Q9NR55 127 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 SLC22A13Q9Y226 551 aa-1.29□□□□□ -2.62
COPB1-212ENST00000534771 MYO7BQ6PIF6 2116 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 CD109Q6YHK3 1445 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 TRBV7-1A0A0A6YYK4 115 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 G3V318 75 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 APOC4-APOC2K7ER74 178 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 EDF1O60869 148 aaKnown RBP-1.3□□□□□ -2.62
COPB1-212ENST00000534771 OR2H2O95918 312 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 IFNA5P01569 189 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 RPL35P42766 123 aaKnown RBP-1.3□□□□□ -2.62
COPB1-212ENST00000534771 DCDP81605 110 aaKnown RBP-1.3□□□□□ -2.62
COPB1-212ENST00000534771 MRPS36P82909 103 aaKnown RBP-1.3□□□□□ -2.62
COPB1-212ENST00000534771 CLEC2BQ92478 149 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 MCEEQ96PE7 176 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 GUCA1BQ9UMX6 200 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 TANC2Q9HCD6 1990 aa-1.3□□□□□ -2.62
COPB1-212ENST00000534771 SPTBN5Q9NRC6 3674 aaKnown RBP-1.3□□□□□ -2.62
COPB1-212ENST00000534771 MAP3K5Q99683 1374 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 ZNF142P52746 1687 aaPredicted RBP-1.31□□□□□ -2.62
COPB1-212ENST00000534771 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.31□□□□□ -2.62
COPB1-212ENST00000534771 LOC107984640A0A0U1RRK4 108 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 TMEM189A5PLL7 270 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 IFNA14P01570 189 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 TRGC2P03986 189 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 IFNA16P05015 189 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 INSL3P51460 131 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 HADHBP55084 474 aaKnown RBP-1.31□□□□□ -2.62
COPB1-212ENST00000534771 HIST1H3AP68431 136 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 HBBP68871 147 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 MSMO1Q15800 293 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 SLC48A1Q6P1K1 146 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 SCP2D1Q9UJQ7 156 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 MPC1Q9Y5U8 109 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 LRP5O75197 1615 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 CASZ1Q86V15 1759 aa-1.31□□□□□ -2.62
COPB1-212ENST00000534771 PDE4DIPQ5VU43 2346 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 USF3Q68DE3 2245 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 A0A087WUJ7 227 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 IFITM5A6NNB3 132 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 HSBP1L1C9JCN9 74 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 PIN1P1O15428 100 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 MFSD11O43934 449 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 CCDC122Q5T0U0 273 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 OR2H1Q9GZK4 316 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 OR2J1Q9GZK6 312 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 PRELID3BQ9Y3B1 194 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 FREM2Q5SZK8 3169 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 UHRF1BP1Q6BDS2 1440 aa-1.32□□□□□ -2.62
COPB1-212ENST00000534771 SPTAN1Q13813 2472 aaKnown RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 TRGV1A0A0A0MS02 117 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 TCRBV3S1A0A5B6 114 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 TMEM210A6NLX4 147 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 DEGS1O15121 323 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 HMGB3O15347 200 aaKnown RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 SAA1P0DJI8 122 aaPredicted RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 MT1GP13640 62 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 POLR2JP52435 117 aaKnown RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 GTF2A1P52655 376 aaPredicted RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 HAMPP81172 84 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 PHF5AQ7RTV0 110 aaKnown RBP-1.33□□□□□ -2.62
COPB1-212ENST00000534771 C4orf33Q8N1A6 199 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 MT1MQ8N339 61 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 NEK7Q8TDX7 302 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 SMIM7Q9BQ49 75 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 FXYD6Q9H0Q3 95 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 WDR7Q9Y4E6 1490 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 PLCE1Q9P212 2302 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 PTPRGP23470 1445 aa-1.33□□□□□ -2.62
COPB1-212ENST00000534771 DMDP11532 3685 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 DLC1Q96QB1 1528 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 LOC107986453A0A1B0GWG9 222 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 H0YAA0 97 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms