RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 AKR1C3P42330 323 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 UBE2G1P62253 170 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 Q6ZTI0 123 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 TMEM183AQ8IXX5 376 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 NHLRC2Q8NBF2 726 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 NAGKQ9UJ70 344 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
USF1-211ENST00000534633 IGLV2-8P01709 118 aa8.63□□□□□ -1.03
USF1-211ENST00000534633 RPL35P42766 123 aaKnown RBP8.63□□□□□ -1.03
USF1-211ENST00000534633 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
USF1-211ENST00000534633 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 A0A096LPF7 62 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 FABP5P3A8MUU1 101 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 SH2D1AO60880 128 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 IFNA1P01562 189 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 S100A9P06702 114 aaKnown RBP8.62□□□□□ -1.03
USF1-211ENST00000534633 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
USF1-211ENST00000534633 APOBP04114 4563 aaKnown RBP8.61□□□□□ -1.03
USF1-211ENST00000534633 PDE6DO43924 150 aa8.61□□□□□ -1.03
USF1-211ENST00000534633 LINC00315P59091 139 aa8.61□□□□□ -1.03
USF1-211ENST00000534633 ZNF506Q5JVG8 444 aa8.61□□□□□ -1.03
USF1-211ENST00000534633 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
USF1-211ENST00000534633 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
USF1-211ENST00000534633 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 KRBOX1C9JBD0 128 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 SIVA1O15304 175 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
USF1-211ENST00000534633 TAGLN2P37802 199 aaKnown RBP8.6□□□□□ -1.03
USF1-211ENST00000534633 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 FAM162BQ5T6X4 162 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
USF1-211ENST00000534633 RASL10AQ92737 203 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 FAM210AQ96ND0 272 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 SDF2L1Q9HCN8 221 aa8.6□□□□□ -1.03
USF1-211ENST00000534633 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
USF1-211ENST00000534633 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 PGPEP1LA6NFU8 196 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 IFITM2Q01629 132 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 CENPWQ5EE01 88 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 C9orf85Q96MD7 179 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 SPXQ9BT56 116 aa8.59□□□□□ -1.03
USF1-211ENST00000534633 C9JQL5 133 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 M0R036 132 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 ORM1P02763 201 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
USF1-211ENST00000534633 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
USF1-211ENST00000534633 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 GRIFINA4D1Z8 144 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 B4DEV8 164 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 TMEM250H0YL14 139 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 EREGO14944 169 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 PAX4O43316 350 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 NXPH4O95158 308 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
USF1-211ENST00000534633 ERVFC1-1P60608 527 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 DNLZQ5SXM8 178 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
USF1-211ENST00000534633 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 M0R2P5 195 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 GNG4P50150 75 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 RPL19P84098 196 aaKnown RBP8.56□□□□□ -1.04
USF1-211ENST00000534633 SLAQ13239 276 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
USF1-211ENST00000534633 PARLQ9H300 379 aa8.56□□□□□ -1.04
USF1-211ENST00000534633 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 K7EN84 100 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
USF1-211ENST00000534633 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 ARMS2P0C7Q2 107 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 FHL2Q14192 279 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 NFE4Q86UQ8 179 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 PTH2Q96A98 100 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 IL36BQ9NZH7 164 aa8.55□□□□□ -1.04
USF1-211ENST00000534633 C9JCJ5 164 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 CRYBA4P53673 196 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
USF1-211ENST00000534633 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 SMIM12Q96EX1 92 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
USF1-211ENST00000534633 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
USF1-211ENST00000534633 H3BVH4 76 aa8.53□□□□□ -1.04
USF1-211ENST00000534633 K7EP13 123 aa8.53□□□□□ -1.04
USF1-211ENST00000534633 MGST1P10620 155 aaKnown RBP8.53□□□□□ -1.04
USF1-211ENST00000534633 ASIPP42127 132 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms