RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 C9orf85Q96MD7 179 aa7.62□□□□□ -1.19
TTC39A-218ENST00000534098 TREM1Q9NP99 234 aa7.62□□□□□ -1.19
TTC39A-218ENST00000534098 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
TTC39A-218ENST00000534098 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
TTC39A-218ENST00000534098 PGPEP1LA6NFU8 196 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 GGTLC3B5MD39 225 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 C17orf112F2Z3M2 114 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 ACOT6Q3I5F7 207 aaPredicted RBP7.61□□□□□ -1.19
TTC39A-218ENST00000534098 ZNF506Q5JVG8 444 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 ARL6IP6Q8N6S5 226 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 CCDC32Q9BV29 185 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 SH3BGRL3Q9H299 93 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
TTC39A-218ENST00000534098 FAM240BA0A1B0GVZ2 78 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 GAGE12JA6NER3 117 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 EIF3GO75821 320 aaKnown RBP eCLIP7.6□□□□□ -1.19
TTC39A-218ENST00000534098 TAS2R45P59539 299 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 GAGE1Q13065 139 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 GAGE4Q13068 117 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 GAGE5Q13069 117 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 GAGE13Q4V321 117 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 FFAR4Q5NUL3 377 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 FAM74A1Q5RGS3 127 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 PTH2Q96A98 100 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 RMI2Q96E14 147 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 DNAJC30Q96LL9 226 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 NMES1Q9C002 83 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 OR5AC2Q9NZP5 309 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 MBD2Q9UBB5 411 aa7.6□□□□□ -1.19
TTC39A-218ENST00000534098 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
TTC39A-218ENST00000534098 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
TTC39A-218ENST00000534098 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
TTC39A-218ENST00000534098 HNRNPA3P51991 378 aaKnown RBP7.59□□□□□ -1.19
TTC39A-218ENST00000534098 GNG5P63218 68 aa7.59□□□□□ -1.19
TTC39A-218ENST00000534098 TMEM75Q8N9X5 138 aa7.59□□□□□ -1.19
TTC39A-218ENST00000534098 NDUFA13Q9P0J0 144 aa7.59□□□□□ -1.19
TTC39A-218ENST00000534098 Q9UF83 564 aa7.59□□□□□ -1.19
TTC39A-218ENST00000534098 IGKV2D-24A0A075B6R9 120 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 A0A087WWC5 75 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 H0YIZ8 118 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 SIX6O95475 246 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 RPL37AP61513 92 aaKnown RBP7.58□□□□□ -1.2
TTC39A-218ENST00000534098 ZFP2Q6ZN57 461 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 NIT1Q86X76 327 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 CYB561D1Q8N8Q1 229 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 DAZAP1Q96EP5 407 aaKnown RBP7.58□□□□□ -1.2
TTC39A-218ENST00000534098 SGK494Q96LW2 274 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 NDFIP1Q9BT67 221 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 PARLQ9H300 379 aa7.58□□□□□ -1.2
TTC39A-218ENST00000534098 TAAR5O14804 337 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 LRRC37A5PQ49AS3 106 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 LINC00479Q96M42 142 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 KLK12Q9UKR0 248 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
TTC39A-218ENST00000534098 A8MWV9 139 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 GCGP01275 180 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 SEC11BP0C7V7 166 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 MT1HL1P0DM35 61 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 UFSP1Q6NVU6 142 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 ATRAIDQ6UW56 229 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 PQLC2Q6ZP29 291 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 URGCP-MRPS24S4R325 110 aa7.56□□□□□ -1.2
TTC39A-218ENST00000534098 SERTM2A0A1B0GWG4 89 aa7.55□□□□□ -1.2
TTC39A-218ENST00000534098 FGF8P55075 233 aaPredicted RBP7.55□□□□□ -1.2
TTC39A-218ENST00000534098 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
TTC39A-218ENST00000534098 LINC00299Q6ZSB3 139 aa7.55□□□□□ -1.2
TTC39A-218ENST00000534098 C14orf178Q8N769 122 aaPredicted RBP7.55□□□□□ -1.2
TTC39A-218ENST00000534098 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
TTC39A-218ENST00000534098 JPT2Q9H910 190 aa7.55□□□□□ -1.2
TTC39A-218ENST00000534098 C14orf177Q52M58 125 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 OR10G9Q8NGN4 311 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 HSPB11Q9Y547 144 aa7.54□□□□□ -1.2
TTC39A-218ENST00000534098 A0A1W2PPV4 95 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 HMGB3O15347 200 aaKnown RBP7.53□□□□□ -1.2
TTC39A-218ENST00000534098 TCRAP04437 139 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 RAB2AP61019 212 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 LGALSLQ3ZCW2 172 aaPredicted RBP7.53□□□□□ -1.2
TTC39A-218ENST00000534098 SMUG1Q53HV7 270 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 S100ZQ8WXG8 99 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 SMIM3Q9BZL3 60 aa7.53□□□□□ -1.2
TTC39A-218ENST00000534098 A0A087WX48 190 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 IGKV3D-20A0A0C4DH25 116 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 UPK1BO75841 260 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 H2BFSP57053 126 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 CYCSP99999 105 aaKnown RBP7.52□□□□□ -1.21
TTC39A-218ENST00000534098 FLI1Q01543 452 aaPredicted RBP7.52□□□□□ -1.21
TTC39A-218ENST00000534098 IFITM3Q01628 133 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 Q0VG73 95 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 ELOBQ15370 118 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 ZFP69Q49AA0 526 aa7.52□□□□□ -1.21
TTC39A-218ENST00000534098 PPP1R1CQ8WVI7 109 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms