RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 ARMS2P0C7Q2 107 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 ZNF876PQ49A33 203 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 Q6ZTC4 211 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 Q6ZTI0 123 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 C18orf15Q96N68 181 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
CMTM1-218ENST00000533915 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
CMTM1-218ENST00000533915 MRPL16Q9NX20 251 aaKnown RBP10.03□□□□□ -0.8
CMTM1-218ENST00000533915 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-218ENST00000533915 TMEM218A2RU14 115 aa10.02□□□□□ -0.81
CMTM1-218ENST00000533915 F8W036 122 aa10.02□□□□□ -0.81
CMTM1-218ENST00000533915 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
CMTM1-218ENST00000533915 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.81
CMTM1-218ENST00000533915 RPL19P84098 196 aaKnown RBP10.02□□□□□ -0.81
CMTM1-218ENST00000533915 CT83Q5H943 113 aa10.02□□□□□ -0.81
CMTM1-218ENST00000533915 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
CMTM1-218ENST00000533915 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
CMTM1-218ENST00000533915 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 F2Z2F3 143 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 CIDEAO60543 219 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 HTN3P15516 51 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 ISOC2Q96AB3 205 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 MUC4Q99102 2169 aa10.01□□□□□ -0.81
CMTM1-218ENST00000533915 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
CMTM1-218ENST00000533915 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 FAM210BQ96KR6 192 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 TPPP3Q9BW30 176 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 SEC11CQ9BY50 192 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 SCRT2Q9NQ03 307 aa10□□□□□ -0.81
CMTM1-218ENST00000533915 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 A8MWV9 139 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 F5H768 121 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 PPP1R2P9O14990 202 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 SNAI2O43623 268 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 CACNG7P62955 275 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 SLAQ13239 276 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 OR4C5Q8NGB2 326 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
CMTM1-218ENST00000533915 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
CMTM1-218ENST00000533915 FAM231BA6NCW3 169 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 M0R381 172 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 MT-ND4LP03901 98 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 NDUFA5Q16718 116 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 GFRA4Q9GZZ7 299 aa9.98□□□□□ -0.81
CMTM1-218ENST00000533915 IGLC6P0CF74 106 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 GZMBP10144 247 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 TCTAP57738 103 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 WDR73Q6P4I2 378 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
CMTM1-218ENST00000533915 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
CMTM1-218ENST00000533915 RHODO00212 210 aa9.96□□□□□ -0.82
CMTM1-218ENST00000533915 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.82
CMTM1-218ENST00000533915 ANAPC16Q96DE5 110 aa9.96□□□□□ -0.82
CMTM1-218ENST00000533915 IGLL5B9A064 214 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 RS1O15537 224 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 NXPH4O95158 308 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 IGHV3-53P01767 116 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 CTRLP40313 264 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 V9GYV3 84 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 TENM2Q9NT68 2774 aa9.95□□□□□ -0.82
CMTM1-218ENST00000533915 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 FOXA3P55318 350 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-218ENST00000533915 CASC10Q5T4H9 136 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 SMIM15Q7Z3B0 74 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 NAT8BQ9UHF3 227 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
CMTM1-218ENST00000533915 IGHV4-4A0A075B6R2 117 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 SSTP61278 116 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
CMTM1-218ENST00000533915 CARHSP1Q9Y2V2 147 aaKnown RBP9.93□□□□□ -0.82
CMTM1-218ENST00000533915 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 H3BNG1 76 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 NTF3P20783 257 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 TWIST1Q15672 202 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 RNF212Q495C1 297 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 C10orf91Q5T1B1 145 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 TMEM88Q6PEY1 159 aa9.92□□□□□ -0.82
CMTM1-218ENST00000533915 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms