RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 CCL25O15444 150 aa8.97□□□□□ -0.97
ATM-222ENST00000533733 IGSF10Q6WRI0 2623 aa8.96□□□□□ -0.97
ATM-222ENST00000533733 CR1P17927 2039 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 MGPP08493 103 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 IGHV4-31P0DP07 118 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 TAL2Q16559 108 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 TMEM95Q3KNT9 176 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 WFDC3Q8IUB2 231 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 OR4C5Q8NGB2 326 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 SCGB3A1Q96QR1 104 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 ZNF702PQ9H963 129 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
ATM-222ENST00000533733 CFAP46Q8IYW2 2715 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 GNRH2O43555 120 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 CDKN1BP46527 198 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 DEFB113Q30KQ7 82 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 PAPPA-AS1Q5QFB9 102 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 ERASQ7Z444 233 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 Q8N2B8 174 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 C9orf85Q96MD7 179 aa8.95□□□□□ -0.98
ATM-222ENST00000533733 TRBV6-5A0A0K0K1A5 114 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 CBY3A6NI87 242 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 LINC01619G3V211 115 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 K7EP13 123 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 CD7P09564 240 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 TMEM86BQ8N661 226 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
ATM-222ENST00000533733 ANKRD17O75179 2603 aaKnown RBP8.94□□□□□ -0.98
ATM-222ENST00000533733 USP9XQ93008 2570 aaPredicted RBP8.94□□□□□ -0.98
ATM-222ENST00000533733 TRGV11A0A075B6L2 103 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 VCYO14598 125 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 NEXN-AS1Q8NBZ9 246 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 NRGNQ92686 78 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 TMEM160Q9NX00 188 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 CYSLTR1Q9Y271 337 aa8.94□□□□□ -0.98
ATM-222ENST00000533733 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
ATM-222ENST00000533733 MUC4Q99102 2169 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 CSMD1Q96PZ7 3565 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 ASH1LQ9NR48 2969 aaKnown RBP8.93□□□□□ -0.98
ATM-222ENST00000533733 IGHV1OR15-1A0A075B7D0 117 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 RNF223E7ERA6 249 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 ZNF688P0C7X2 276 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 SRD5A1P18405 259 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 HOXD3P31249 432 aaPredicted RBP8.93□□□□□ -0.98
ATM-222ENST00000533733 LINC00315P59091 139 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 DEFB1P60022 68 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 TMEM141Q96I45 108 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 KIR2DL4Q99706 377 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 PEMTQ9UBM1 199 aa8.93□□□□□ -0.98
ATM-222ENST00000533733 TRAV12-3A0A0B4J271 114 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
ATM-222ENST00000533733 SYNJ2BPP57105 145 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 ZNF843Q8N446 348 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 WFDC12Q8WWY7 111 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 RPL39LQ96EH5 51 aaKnown RBP8.92□□□□□ -0.98
ATM-222ENST00000533733 CSTL1Q9H114 145 aa8.92□□□□□ -0.98
ATM-222ENST00000533733 SPG11Q96JI7 2443 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 A8MTW9 85 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 Q5PR19 223 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 PIK3CD-AS1Q5SR53 167 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 Q6ZVH6 145 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 JMJD8Q96S16 334 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 TIMM17AQ99595 171 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 CHAC1Q9BUX1 264 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 TRBV25-1A0A075B6N4 114 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 HOXA3O43365 443 aaPredicted RBP8.91□□□□□ -0.98
ATM-222ENST00000533733 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 RIPPLY3P57055 190 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 OR11H1Q8NG94 326 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 OR11H2Q8NH07 326 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 BAALCQ8WXS3 180 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 ZFYVE26Q68DK2 2539 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
ATM-222ENST00000533733 FLNCQ14315 2725 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 TRBV27A0A0K0K1C4 114 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 RHOHQ15669 191 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 AMMECR1LQ6DCA0 310 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 SUMO4Q6EEV6 95 aa8.9□□□□□ -0.98
ATM-222ENST00000533733 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
ATM-222ENST00000533733 ZNF256Q9Y2P7 627 aaPredicted RBP8.9□□□□□ -0.98
ATM-222ENST00000533733 EDN2P20800 178 aa8.89□□□□□ -0.99
ATM-222ENST00000533733 TCTEX1D4Q5JR98 221 aa8.89□□□□□ -0.99
ATM-222ENST00000533733 C10orf99Q6UWK7 81 aa8.89□□□□□ -0.99
ATM-222ENST00000533733 C4orf3Q8WVX3 66 aa8.89□□□□□ -0.99
ATM-222ENST00000533733 MYO18BQ8IUG5 2567 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms