RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 LENEPQ9Y5L5 61 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 FAM19A4Q96LR4 140 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 CD7P09564 240 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 LINC00614P0C842 121 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 BEAN1Q3B7T3 259 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 Q6AWC8 147 aa13.7□□□□□ -0.22
SMPD1-208ENST00000533123 SRIP30626 198 aa13.69□□□□□ -0.22
SMPD1-208ENST00000533123 APRG1Q8IVJ8 170 aa13.69□□□□□ -0.22
SMPD1-208ENST00000533123 KCNS1Q96KK3 526 aa13.69□□□□□ -0.22
SMPD1-208ENST00000533123 AMTP48728 403 aa13.68□□□□□ -0.22
SMPD1-208ENST00000533123 RPS20P60866 119 aaKnown RBP13.68□□□□□ -0.22
SMPD1-208ENST00000533123 WIPF1O43516 503 aa13.68□□□□□ -0.22
SMPD1-208ENST00000533123 IGLC6P0CF74 106 aa13.68□□□□□ -0.22
SMPD1-208ENST00000533123 FER1L6-AS1Q8NA97 138 aa13.68□□□□□ -0.22
SMPD1-208ENST00000533123 MGAM2Q2M2H8 2515 aa13.68□□□□□ -0.22
SMPD1-208ENST00000533123 COL5A1-AS1Q5SY13 56 aa13.67□□□□□ -0.22
SMPD1-208ENST00000533123 IGKV3-20P01619 116 aa13.67□□□□□ -0.22
SMPD1-208ENST00000533123 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
SMPD1-208ENST00000533123 RIGQ13278 110 aa13.67□□□□□ -0.22
SMPD1-208ENST00000533123 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
SMPD1-208ENST00000533123 A0A0J9YX75 114 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 KNCNA6PVL3 124 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 OR11H12B2RN74 326 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 PMCHP20382 165 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 BORCS7Q96B45 105 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 NOTCH1P46531 2555 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
SMPD1-208ENST00000533123 EBLN2Q6P2I7 272 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 NIT1Q86X76 327 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 WFDC10AQ9H1F0 79 aa13.66□□□□□ -0.22
SMPD1-208ENST00000533123 FOXI2Q6ZQN5 318 aa13.65□□□□□ -0.22
SMPD1-208ENST00000533123 DNHD1Q96M86 4753 aa13.65□□□□□ -0.23
SMPD1-208ENST00000533123 KRTAP21-3Q3LHN1 58 aa13.64□□□□□ -0.23
SMPD1-208ENST00000533123 C19orf73Q9NVV2 129 aa13.64□□□□□ -0.23
SMPD1-208ENST00000533123 UQCR10Q9UDW1 63 aa13.64□□□□□ -0.23
SMPD1-208ENST00000533123 C3orf79P0CE67 100 aa13.64□□□□□ -0.23
SMPD1-208ENST00000533123 IGLC3P0DOY3 106 aa13.64□□□□□ -0.23
SMPD1-208ENST00000533123 G3V4G9 280 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 ALKBH7Q9BT30 221 aaPredicted RBP13.63□□□□□ -0.23
SMPD1-208ENST00000533123 NBEAL1Q6ZS30 2694 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 TRBV7-9A0A0J9YWB2 115 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 KLLNB2CW77 178 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
SMPD1-208ENST00000533123 LOC102724200A0A096LPH7 203 aaPredicted RBP13.62□□□□□ -0.23
SMPD1-208ENST00000533123 NTF3P20783 257 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 CMC4P56277 68 aaPredicted RBP13.62□□□□□ -0.23
SMPD1-208ENST00000533123 FAM19A2Q8N3H0 131 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 STPG4Q8N801 248 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 A0A1B0GW15 77 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 HLA-DRB4P13762 266 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 TWIST1Q15672 202 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 GATD1Q8NB37 220 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 C18orf32Q8TCD1 76 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 HLA-DRB4X5D2U9 266 aa13.62□□□□□ -0.23
SMPD1-208ENST00000533123 H3BMM0 161 aa13.61□□□□□ -0.23
SMPD1-208ENST00000533123 M0R2Z0 102 aa13.61□□□□□ -0.23
SMPD1-208ENST00000533123 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
SMPD1-208ENST00000533123 FAM110AQ9BQ89 295 aa13.61□□□□□ -0.23
SMPD1-208ENST00000533123 TRAV12-2A0A075B6T6 113 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 ANXA2RQ3ZCQ2 193 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 Q6ZN92 141 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 LAMTOR2Q9Y2Q5 125 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 DEFB125Q8N687 156 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 CNFNQ9BYD5 112 aa13.6□□□□□ -0.23
SMPD1-208ENST00000533123 H3BVH4 76 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
SMPD1-208ENST00000533123 HNRNPA3P51991 378 aaKnown RBP13.59□□□□□ -0.23
SMPD1-208ENST00000533123 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 ZNF493Q6ZR52 646 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 OR10AG1Q8NH19 301 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 CBY1Q9Y3M2 126 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 TIMM8BQ9Y5J9 83 aaPredicted RBP13.59□□□□□ -0.23
SMPD1-208ENST00000533123 TRAV12-3A0A0B4J271 114 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 EGFEM1PQ0D2K5 195 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 AMN1Q8IY45 258 aa13.59□□□□□ -0.23
SMPD1-208ENST00000533123 SPRY2O43597 315 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 LEPP41159 167 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 SAMD5Q5TGI4 173 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 STHQ8IWL8 128 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 ODF3Q96PU9 254 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 Q8N1Y9 231 aa13.58□□□□□ -0.24
SMPD1-208ENST00000533123 RBMY1BA6NDE4 496 aaKnown RBP13.57□□□□□ -0.24
SMPD1-208ENST00000533123 RBMY1EA6NEQ0 496 aaKnown RBP13.57□□□□□ -0.24
SMPD1-208ENST00000533123 GNRH2O43555 120 aa13.57□□□□□ -0.24
SMPD1-208ENST00000533123 RBMY1DP0C7P1 496 aaKnown RBP13.57□□□□□ -0.24
SMPD1-208ENST00000533123 MAJINQ3KP22 176 aa13.57□□□□□ -0.24
SMPD1-208ENST00000533123 ATOH7Q8N100 152 aa13.57□□□□□ -0.24
SMPD1-208ENST00000533123 C7orf71A4D174 169 aa13.56□□□□□ -0.24
SMPD1-208ENST00000533123 FXYD7P58549 80 aa13.56□□□□□ -0.24
SMPD1-208ENST00000533123 OR5AL1P0C617 328 aa13.56□□□□□ -0.24
SMPD1-208ENST00000533123 CDKN1BP46527 198 aa13.56□□□□□ -0.24
SMPD1-208ENST00000533123 FAM104BQ5XKR9 115 aa13.56□□□□□ -0.24
SMPD1-208ENST00000533123 SNAI2O43623 268 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms