RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GAGE1Q13065 139 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 GAGE4Q13068 117 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 GAGE5Q13069 117 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 IL15RAQ13261 267 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 ELOBQ15370 118 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 LRRC37A5PQ49AS3 106 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 GAGE13Q4V321 117 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 PQLC2Q6ZP29 291 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 CIRBP-AS1Q8TBR5 109 aa7.6□□□□□ -1.19
CMTM1-216ENST00000533078 SDHCQ99643 169 aaPredicted RBP7.6□□□□□ -1.19
CMTM1-216ENST00000533078 A0A087WX48 190 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 FAM240BA0A1B0GVZ2 78 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
CMTM1-216ENST00000533078 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
CMTM1-216ENST00000533078 CYCSP99999 105 aaKnown RBP7.59□□□□□ -1.19
CMTM1-216ENST00000533078 ZNF506Q5JVG8 444 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 OR10G9Q8NGN4 311 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 PTH2Q96A98 100 aa7.59□□□□□ -1.19
CMTM1-216ENST00000533078 A0A1B0GVG6 124 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 RNF222A6NCQ9 220 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 PLA2G10O15496 165 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 PTTG1O95997 202 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 GCGP01275 180 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 LGALSLQ3ZCW2 172 aaPredicted RBP7.58□□□□□ -1.2
CMTM1-216ENST00000533078 DPPA3Q6W0C5 159 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 Q8N3U1 123 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 OR5AC2Q9NZP5 309 aa7.58□□□□□ -1.2
CMTM1-216ENST00000533078 PGPEP1LA6NFU8 196 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 IGLV2-11P01706 119 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 PET100P0DJ07 73 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 DEFA1P59665 94 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 DEFA3P59666 94 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 Q0VG73 95 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 MZT2BQ6NZ67 158 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 UBE2WQ96B02 151 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 C9orf85Q96MD7 179 aa7.57□□□□□ -1.2
CMTM1-216ENST00000533078 PFDN1O60925 122 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 GNG5P63218 68 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 IFITM3Q01628 133 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 TVP23CQ96ET8 276 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 SGK494Q96LW2 274 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 C1orf43Q9BWL3 253 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 PARLQ9H300 379 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
CMTM1-216ENST00000533078 RHODO00212 210 aa7.55□□□□□ -1.2
CMTM1-216ENST00000533078 CRPP02741 224 aa7.55□□□□□ -1.2
CMTM1-216ENST00000533078 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-216ENST00000533078 DMRTA1Q5VZB9 504 aa7.55□□□□□ -1.2
CMTM1-216ENST00000533078 NIT1Q86X76 327 aa7.55□□□□□ -1.2
CMTM1-216ENST00000533078 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
CMTM1-216ENST00000533078 SIX6O95475 246 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 TCRAP04437 139 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 RNASE3P12724 160 aaKnown RBP7.54□□□□□ -1.2
CMTM1-216ENST00000533078 ASIPP42127 132 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 SAPCD1Q5SSQ6 148 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 PRNTQ86SH4 94 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 SMIM3Q9BZL3 60 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 HSPB11Q9Y547 144 aa7.54□□□□□ -1.2
CMTM1-216ENST00000533078 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
CMTM1-216ENST00000533078 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
CMTM1-216ENST00000533078 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-216ENST00000533078 FLI1Q01543 452 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-216ENST00000533078 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-216ENST00000533078 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
CMTM1-216ENST00000533078 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 H0YIZ8 118 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
CMTM1-216ENST00000533078 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 RPL12P30050 165 aaKnown RBP7.52□□□□□ -1.21
CMTM1-216ENST00000533078 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
CMTM1-216ENST00000533078 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 C14orf178Q8N769 122 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-216ENST00000533078 OR10G7Q8NGN6 311 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 PPP1R1CQ8WVI7 109 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
CMTM1-216ENST00000533078 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
CMTM1-216ENST00000533078 A0A0D9SG52 128 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 CDC34P49427 236 aaPredicted RBP7.51□□□□□ -1.21
CMTM1-216ENST00000533078 RAB2AP61019 212 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 PKIAP61925 76 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 HSD17B11Q8NBQ5 300 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
CMTM1-216ENST00000533078 LRP2P98164 4655 aa7.5□□□□□ -1.21
CMTM1-216ENST00000533078 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
CMTM1-216ENST00000533078 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
CMTM1-216ENST00000533078 B4DEV8 164 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms