RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 K7EMI3 77 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 AVPP01185 164 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
UBXN1-213ENST00000532904 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 RASL10AQ92737 203 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 TRBV7-3A0A075B6L6 115 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 H3BUX3 64 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 IGHG2P01859 326 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 SUMO2P61956 95 aaKnown RBP13.6□□□□□ -0.23
UBXN1-213ENST00000532904 ZFAND2AQ8N6M9 145 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 ZNF479Q96JC4 524 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 HIST1H4GQ99525 98 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 CHTOPQ9Y3Y2 248 aaKnown RBP13.6□□□□□ -0.23
UBXN1-213ENST00000532904 TMEM238C9JI98 176 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 NEXN-AS1Q8NBZ9 246 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 ANKRD17O75179 2603 aaKnown RBP13.59□□□□□ -0.23
UBXN1-213ENST00000532904 MYMXA0A1B0GTQ4 84 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 F8W1H4 67 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 H3BUA1 57 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
UBXN1-213ENST00000532904 TRAV21A0A0B4J279 112 aa13.58□□□□□ -0.24
UBXN1-213ENST00000532904 A0A1B0GWB2 263 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 M0R381 172 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 OVOL1O14753 267 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 DEFB113Q30KQ7 82 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 OR11H1Q8NG94 326 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 OR11H2Q8NH07 326 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 MED14OSP0DP75 135 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 ASIPP42127 132 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 CSMD1Q96PZ7 3565 aa13.57□□□□□ -0.24
UBXN1-213ENST00000532904 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 J3KRW8 73 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 SOCS3O14543 225 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 ARL3P36405 182 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 LY6EQ16553 131 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
UBXN1-213ENST00000532904 KLK15Q9H2R5 256 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 ZNF580Q9UK33 172 aa13.56□□□□□ -0.24
UBXN1-213ENST00000532904 S100A4P26447 101 aaKnown RBP13.55□□□□□ -0.24
UBXN1-213ENST00000532904 RRN3P1Q2M238 152 aa13.55□□□□□ -0.24
UBXN1-213ENST00000532904 SPANXB1Q9NS25 103 aaPredicted RBP13.55□□□□□ -0.24
UBXN1-213ENST00000532904 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
UBXN1-213ENST00000532904 KRTAP10-9P60411 292 aa13.55□□□□□ -0.24
UBXN1-213ENST00000532904 WFDC2Q14508 124 aa13.55□□□□□ -0.24
UBXN1-213ENST00000532904 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
UBXN1-213ENST00000532904 BAALCQ8WXS3 180 aa13.55□□□□□ -0.24
UBXN1-213ENST00000532904 FAM19A4Q96LR4 140 aa13.55□□□□□ -0.24
UBXN1-213ENST00000532904 SPRY2O43597 315 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 ANXA2RQ3ZCQ2 193 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 PHLDA3Q9Y5J5 127 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 NDUFA4O00483 81 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 TGFAP01135 160 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 C2orf66Q6UXQ4 117 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 UNQ9165/PRO28630Q6UXU0 137 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 USMG5Q96IX5 58 aa13.54□□□□□ -0.24
UBXN1-213ENST00000532904 LGALS1P09382 135 aaKnown RBP13.53□□□□□ -0.24
UBXN1-213ENST00000532904 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
UBXN1-213ENST00000532904 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
UBXN1-213ENST00000532904 CR1P17927 2039 aa13.53□□□□□ -0.24
UBXN1-213ENST00000532904 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
UBXN1-213ENST00000532904 H3BMG7 143 aa13.52□□□□□ -0.24
UBXN1-213ENST00000532904 FSHBP01225 129 aa13.52□□□□□ -0.24
UBXN1-213ENST00000532904 PPP1R17O96001 155 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 MGPP08493 103 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 IGHV4-31P0DP07 118 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 POM121L12Q8N7R1 296 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 PTPN13Q12923 2485 aa13.52□□□□□ -0.25
UBXN1-213ENST00000532904 VPS13CQ709C8 3753 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 PRSS29PA6NIE9 313 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 PRADC1Q9BSG0 188 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 FBN2P35556 2912 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 RNASE4P34096 147 aaKnown RBP13.51□□□□□ -0.25
UBXN1-213ENST00000532904 DEFB1P60022 68 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 DEFB112Q30KQ8 113 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 Q5PR19 223 aa13.51□□□□□ -0.25
UBXN1-213ENST00000532904 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
UBXN1-213ENST00000532904 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
UBXN1-213ENST00000532904 RNASE3P12724 160 aaKnown RBP13.5□□□□□ -0.25
UBXN1-213ENST00000532904 BLCAPP62952 87 aa13.5□□□□□ -0.25
UBXN1-213ENST00000532904 PRO0461Q9UI25 63 aa13.5□□□□□ -0.25
UBXN1-213ENST00000532904 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
UBXN1-213ENST00000532904 CSPG4Q6UVK1 2322 aa13.5□□□□□ -0.25
UBXN1-213ENST00000532904 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
UBXN1-213ENST00000532904 AGRNO00468 2067 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 J3QR89 54 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 GNRH2O43555 120 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 NXPH4O95158 308 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 GAGE13Q4V321 117 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 SAMD13Q5VXD3 122 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
UBXN1-213ENST00000532904 AMTNQ6UX39 209 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 HOXA3O43365 443 aaPredicted RBP13.49□□□□□ -0.25
UBXN1-213ENST00000532904 CFHR3Q02985 330 aa13.49□□□□□ -0.25
UBXN1-213ENST00000532904 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms