RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 BCL2L11O43521 198 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 LINC00315P59091 139 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 ZNF506Q5JVG8 444 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 DPPA3Q6W0C5 159 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.53
PHRF1-204ENST00000532550 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 B4DEV8 164 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 PAGE4O60829 102 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 PFDN1O60925 122 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 ASIPP42127 132 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 ZC2HC1AQ96GY0 325 aa11.76□□□□□ -0.53
PHRF1-204ENST00000532550 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 EVI2AP22794 236 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 CRIP1P50238 77 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 LGALSLQ3ZCW2 172 aaPredicted RBP11.75□□□□□ -0.53
PHRF1-204ENST00000532550 FAM162BQ5T6X4 162 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 COX8CQ7Z4L0 72 aa11.75□□□□□ -0.53
PHRF1-204ENST00000532550 TRBV6-1A0A0K0K1D8 114 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 A0A1B0GV50 99 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 K7EP13 123 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 AKR1C3P42330 323 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 RHOHQ15669 191 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 WFDC10BQ8IUB3 73 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 IL36BQ9NZH7 164 aa11.74□□□□□ -0.53
PHRF1-204ENST00000532550 A8MWV9 139 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 KRBOX1C9JBD0 128 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 M0R036 132 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 SH2D1AO60880 128 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
PHRF1-204ENST00000532550 TPT1P13693 172 aaKnown RBP11.73□□□□□ -0.53
PHRF1-204ENST00000532550 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
PHRF1-204ENST00000532550 LTAP01374 205 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
PHRF1-204ENST00000532550 TIRAPP58753 221 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
PHRF1-204ENST00000532550 GRIFINA4D1Z8 144 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 H3BVH4 76 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 DNAH10OSP0CZ25 163 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 DNLZQ5SXM8 178 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 PARLQ9H300 379 aa11.71□□□□□ -0.53
PHRF1-204ENST00000532550 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 EREGO14944 169 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
PHRF1-204ENST00000532550 C10orf126Q8N4M7 172 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 MSRB1Q9NZV6 116 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 PHLDA3Q9Y5J5 127 aa11.7□□□□□ -0.54
PHRF1-204ENST00000532550 TMSB15BA0A087X1C1 80 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 CRYGDP07320 174 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 EIF5AL1Q6IS14 154 aaKnown RBP11.69□□□□□ -0.54
PHRF1-204ENST00000532550 ATP6V0E2Q8NHE4 81 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 JPT2Q9H910 190 aa11.69□□□□□ -0.54
PHRF1-204ENST00000532550 Q6ZSN1 163 aa11.68□□□□□ -0.54
PHRF1-204ENST00000532550 BAGE2Q86Y30 109 aa11.68□□□□□ -0.54
PHRF1-204ENST00000532550 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
PHRF1-204ENST00000532550 SCO2A0A1W2PP80 73 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 RAB5CP51148 216 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 KRTAP10-2P60368 255 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 ERVFC1-1P60608 527 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 LELP1Q5T871 98 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
PHRF1-204ENST00000532550 TEX46H3BTG2 121 aa11.66□□□□□ -0.54
PHRF1-204ENST00000532550 RHODO00212 210 aa11.66□□□□□ -0.54
PHRF1-204ENST00000532550 Q6ZNX1 250 aa11.66□□□□□ -0.54
PHRF1-204ENST00000532550 TCTE3Q8IZS6 198 aa11.66□□□□□ -0.54
PHRF1-204ENST00000532550 SCRT2Q9NQ03 307 aa11.66□□□□□ -0.54
PHRF1-204ENST00000532550 GAGE12JA6NER3 117 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 M0R381 172 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 CDK2AP2O75956 126 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 CCL20P78556 96 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 GAGE1Q13065 139 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 GAGE4Q13068 117 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 GAGE5Q13069 117 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 GAGE13Q4V321 117 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 LINC01556Q5JQF7 62 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 UFSP1Q6NVU6 142 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 SFRP2Q96HF1 295 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
PHRF1-204ENST00000532550 LRP1BQ9NZR2 4599 aa11.65□□□□□ -0.55
PHRF1-204ENST00000532550 TRAV1-1A0A0B4J248 108 aa11.64□□□□□ -0.55
PHRF1-204ENST00000532550 ZFP82Q8N141 532 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms