RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 CT83Q5H943 113 aa5.71□□□□□ -1.5
TRIM49-202ENST00000532501 C11orf72Q8NBR9 251 aa5.71□□□□□ -1.5
TRIM49-202ENST00000532501 IL17DQ8TAD2 202 aa5.71□□□□□ -1.5
TRIM49-202ENST00000532501 SFRP2Q96HF1 295 aa5.71□□□□□ -1.5
TRIM49-202ENST00000532501 OSTCQ9NRP0 149 aa5.71□□□□□ -1.5
TRIM49-202ENST00000532501 TMEM189A5PLL7 270 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 M0R036 132 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 GNRH2O43555 120 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 GATCO43716 136 aaKnown RBP5.7□□□□□ -1.5
TRIM49-202ENST00000532501 MT-ND4LP03901 98 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 S100A4P26447 101 aaKnown RBP5.7□□□□□ -1.5
TRIM49-202ENST00000532501 ZNF415Q09FC8 603 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 SVBPQ8N300 66 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 NUDT10Q8NFP7 164 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 OR10G8Q8NGN5 311 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
TRIM49-202ENST00000532501 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 NUDT11Q96G61 164 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 C16orf74Q96GX8 76 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 RPP21Q9H633 154 aaKnown RBP5.7□□□□□ -1.5
TRIM49-202ENST00000532501 GSN-AS1Q9NRJ2 163 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 MDFICQ9P1T7 246 aa5.7□□□□□ -1.5
TRIM49-202ENST00000532501 RYR3Q15413 4870 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 TMSB15BA0A087X1C1 80 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 A8MWL6 223 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 SNAPINO95295 136 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 APOC3P02656 99 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 TYMSP04818 313 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 ASIPP42127 132 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 NANOS2P60321 138 aaKnown RBP5.69□□□□□ -1.5
TRIM49-202ENST00000532501 RHEBQ15382 184 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 DNLZQ5SXM8 178 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 OR2D3Q8NGH3 330 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 RNASE7Q9H1E1 156 aaKnown RBP5.69□□□□□ -1.5
TRIM49-202ENST00000532501 C11orf68Q9H3H3 251 aaKnown RBP5.69□□□□□ -1.5
TRIM49-202ENST00000532501 VPS13DQ5THJ4 4388 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 CSMD3Q7Z407 3707 aa5.69□□□□□ -1.5
TRIM49-202ENST00000532501 IGHV3-16A0A0C4DH30 117 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 TEX48A0A1B0GUV7 120 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 A0A1W2PPQ1 181 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 SNURFLB1AK76 121 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 MED14OSP0DP75 135 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 RNASE3P12724 160 aaKnown RBP5.68□□□□□ -1.5
TRIM49-202ENST00000532501 C12orf74Q32Q52 190 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 SPXQ9BT56 116 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 CTDSP1Q9GZU7 261 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 IL36BQ9NZH7 164 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 DKK2Q9UBU2 259 aa5.68□□□□□ -1.5
TRIM49-202ENST00000532501 GZMBP10144 247 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 TCL1AP56279 114 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 RNF212Q495C1 297 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 Q6ZTC4 211 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 Q6ZTI0 123 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 NOP10Q9NPE3 64 aaKnown RBP5.67□□□□□ -1.5
TRIM49-202ENST00000532501 MRPL16Q9NX20 251 aaKnown RBP5.67□□□□□ -1.5
TRIM49-202ENST00000532501 V9GYV3 84 aa5.67□□□□□ -1.5
TRIM49-202ENST00000532501 A0A087WWC5 75 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 F2Z2F3 143 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 OR5AL1P0C617 328 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 S100A1P23297 94 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 FOXA3P55318 350 aaPredicted RBP5.66□□□□□ -1.5
TRIM49-202ENST00000532501 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
TRIM49-202ENST00000532501 ZFAND6Q6FIF0 208 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 LINC00612Q8N6U2 182 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 FER1L6-AS1Q8NA97 138 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 SYT8Q8NBV8 401 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 BORCS7Q96B45 105 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 NDUFAF3Q9BU61 184 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 TMEM242Q9NWH2 141 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 TIMM8BQ9Y5J9 83 aaPredicted RBP5.66□□□□□ -1.5
TRIM49-202ENST00000532501 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
TRIM49-202ENST00000532501 GAGE12BA1L429 117 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 C7orf77A4D0Y5 90 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 LYRM9A8MSI8 78 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 H3BVH4 76 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 M0R2P5 195 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 SNAI2O43623 268 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 GAGE7O76087 117 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 ARMS2P0C7Q2 107 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 GAGE12FP0CL80 117 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 GAGE12GP0CL81 117 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 GAGE12IP0CL82 117 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 CACNG7P62955 275 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 LGALS9BQ3B8N2 356 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 KCNIP4Q6PIL6 250 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 POM121L12Q8N7R1 296 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 IMMP2LQ96T52 175 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 RPS10P5Q9NQ39 176 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 NAT8BQ9UHF3 227 aa5.65□□□□□ -1.5
TRIM49-202ENST00000532501 MUC4Q99102 2169 aa5.65□□□□□ -1.51
TRIM49-202ENST00000532501 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms