RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 IGHV4-38-2P0DP08 117 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 FANCMQ8IYD8 2048 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 DLEC1Q9Y238 1755 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 G3V318 75 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 CTSGP08311 255 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 ZNF883P0CG24 379 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 SPART-AS1P0CW21 52 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 NANOS2P60321 138 aaKnown RBP6.36□□□□□ -1.39
CTNND1-231ENST00000532463 HIGD2AQ9BW72 106 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 CADP27708 2225 aa6.36□□□□□ -1.39
CTNND1-231ENST00000532463 TDRD6O60522 2096 aaKnown RBP6.36□□□□□ -1.39
CTNND1-231ENST00000532463 K7EN84 100 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 CD59P13987 128 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 PLA2G2AP14555 144 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 MIAQ16674 131 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 AGPAT4-IT1Q9H0P7 198 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 QRFPP83859 136 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 WFDC10AQ9H1F0 79 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 SPRR3Q9UBC9 169 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 MPDZO75970 2070 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 THSD7AQ9UPZ6 1657 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 ZFAND3Q9H8U3 227 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 IGHV1-69P01742 117 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 MSMBP08118 114 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 PI4KAP42356 2102 aa6.35□□□□□ -1.39
CTNND1-231ENST00000532463 H3BUA1 57 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 ZNF833PQ6ZTB9 187 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 MYO16Q9Y6X6 1858 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 LYPD2Q6UXB3 125 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 RNF144BQ7Z419 303 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 GGNQ86UU5 652 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 TRBV7-3A0A075B6L6 115 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 UBE2D2P62837 147 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 LINC00173Q6ZV60 143 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 TTTY13Q9BZ97 58 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 BPESC1Q9GZL8 116 aa6.34□□□□□ -1.39
CTNND1-231ENST00000532463 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.34□□□□□ -1.4
CTNND1-231ENST00000532463 LRRK1Q38SD2 2015 aa6.34□□□□□ -1.4
CTNND1-231ENST00000532463 IGLV3-12A0A075B6K2 115 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 CSRP2Q16527 193 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 RUSC1-AS1Q66K80 236 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 TP53BP1Q12888 1972 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-231ENST00000532463 WT1P19544 449 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-231ENST00000532463 RNF138Q8WVD3 245 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 COL4A1P02462 1669 aa6.33□□□□□ -1.4
CTNND1-231ENST00000532463 IGKV1-6A0A0C4DH72 117 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 COL8A2P25067 703 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 TDRG1Q3Y452 100 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 MIFP14174 115 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 A0A096LNI7 61 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 CCKP06307 115 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 WT1-ASQ06250 92 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 ZNF581Q9P0T4 197 aa6.32□□□□□ -1.4
CTNND1-231ENST00000532463 CSDC2Q9Y534 153 aaKnown RBP6.32□□□□□ -1.4
CTNND1-231ENST00000532463 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
CTNND1-231ENST00000532463 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 LINC00311Q8N616 119 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 SPTBN2O15020 2390 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 IGHV4-61A0A0C4DH41 118 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 PRYO14603 147 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 Q8N9W7 124 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 DOCK11Q5JSL3 2073 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 MYOFQ9NZM1 2061 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 KIF26BQ2KJY2 2108 aa6.31□□□□□ -1.4
CTNND1-231ENST00000532463 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-231ENST00000532463 ODF1Q14990 250 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 LAMB2P55268 1798 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 MED14OSP0DP75 135 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 Q6Q795 121 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 SOSTDC1Q6X4U4 206 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 J3QLI3 93 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 EBI3Q14213 229 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 Q6ZVQ6 151 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 C1orf158Q8N1D5 194 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 TMEM263Q8WUH6 116 aaKnown RBP6.3□□□□□ -1.4
CTNND1-231ENST00000532463 ZDBF2Q9HCK1 2354 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 LMO1P25800 156 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 ZNF831Q5JPB2 1677 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 LOXP28300 417 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-231ENST00000532463 SPATA12Q7Z6I5 190 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
CTNND1-231ENST00000532463 ANKRD36A6QL64 1941 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 NUPR1O60356 82 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 PINLYPA6NC86 204 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-231ENST00000532463 FHL1Q13642 323 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 BRWD3Q6RI45 1802 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms