RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TP53TG1Q9Y2A0 90 aa6.09□□□□□ -1.43
CTNND1-230ENST00000532245 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
CTNND1-230ENST00000532245 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
CTNND1-230ENST00000532245 IL15RAQ13261 267 aa6.09□□□□□ -1.43
CTNND1-230ENST00000532245 H3BMM0 161 aa6.09□□□□□ -1.44
CTNND1-230ENST00000532245 EGR2P11161 476 aaPredicted RBP6.09□□□□□ -1.44
CTNND1-230ENST00000532245 UBE2WQ96B02 151 aa6.09□□□□□ -1.44
CTNND1-230ENST00000532245 IGHV3-30P01768 117 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 IGHV3-33P01772 117 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 SMIM6P0DI80 62 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 IGHV3-30-3P0DP02 117 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 IGHV3-30-5P0DP03 117 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 EBI3Q14213 229 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 MRPL23Q16540 153 aaKnown RBP6.08□□□□□ -1.44
CTNND1-230ENST00000532245 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 SIGLEC8Q9NYZ4 499 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 VWC2LB2RUY7 222 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 DEFB114Q30KQ6 69 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 UQCR10Q9UDW1 63 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 ZNF815PA8K554 130 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 RPL24P83731 157 aaKnown RBP6.08□□□□□ -1.44
CTNND1-230ENST00000532245 KLF5Q13887 457 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-230ENST00000532245 LTAP01374 205 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 BRWD1-AS2P59051 145 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 FAM104BQ5XKR9 115 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
CTNND1-230ENST00000532245 ZNF48Q96MX3 618 aaPredicted RBP6.07□□□□□ -1.44
CTNND1-230ENST00000532245 JPT2Q9H910 190 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 ATG2AQ2TAZ0 1938 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 INS-IGF2F8WCM5 200 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
CTNND1-230ENST00000532245 Q8N1Y9 231 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 CST9LQ9H4G1 147 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 USP9XQ93008 2570 aaPredicted RBP6.07□□□□□ -1.44
CTNND1-230ENST00000532245 IGHV1-24A0A0C4DH33 117 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 SLC25A20O43772 301 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 SMIM13P0DJ93 91 aa6.07□□□□□ -1.44
CTNND1-230ENST00000532245 ZNF625Q96I27 306 aaPredicted RBP6.07□□□□□ -1.44
CTNND1-230ENST00000532245 C9JQL5 133 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 ZNF124Q15973 351 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 MRPL51Q4U2R6 128 aaKnown RBP6.06□□□□□ -1.44
CTNND1-230ENST00000532245 TRBV24-1A0A075B6N3 115 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 PSMB8P28062 276 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 CT83Q5H943 113 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 ATP6V0E2Q8NHE4 81 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 LGALS9O00182 355 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 PLP1P60201 277 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 KMT2EQ8IZD2 1858 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 TYMSP04818 313 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 HHLA3Q9XRX5 114 aa6.06□□□□□ -1.44
CTNND1-230ENST00000532245 A0A0J9YX75 114 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 FAM231BA6NCW3 169 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BKO60814 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BJP06899 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BOP23527 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BBP33778 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BDP58876 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BCP62807 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST2H2BEQ16778 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BHQ93079 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 LAMTOR2Q9Y2Q5 125 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 CRYGBP07316 175 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 PLNP26678 52 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 USP9YO00507 2555 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-230ENST00000532245 XCL1P47992 114 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 K7EQD1 137 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 TIMM21Q9BVV7 248 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 NACAE9PAV3 2078 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-230ENST00000532245 IGKV2-29A2NJV5 120 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-230ENST00000532245 CBY1Q9Y3M2 126 aa6.05□□□□□ -1.44
CTNND1-230ENST00000532245 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 SFTA2Q6UW10 78 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 V9GYV3 84 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 FABP2P12104 132 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 RANBP2P49792 3224 aaKnown RBP6.04□□□□□ -1.44
CTNND1-230ENST00000532245 UBE2CO00762 179 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 PFN2P35080 140 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 FAM231DQ6ZW35 169 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 PLEKHB2Q96CS7 222 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 FAM167A-AS1Q96KT0 104 aa6.04□□□□□ -1.44
CTNND1-230ENST00000532245 NDUFA7O95182 113 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 Q8N6K4 173 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 C11orf52Q96A22 123 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 POLR3KQ9Y2Y1 108 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-230ENST00000532245 IGKV1D-37A0A075B6S9 117 aa6.03□□□□□ -1.44
CTNND1-230ENST00000532245 C9orf47Q6ZRZ4 202 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms