RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 NUDT11Q96G61 164 aa15.72■□□□□ 0.11
LRRK1-208ENST00000532029 FAM210BQ96KR6 192 aa15.72■□□□□ 0.11
LRRK1-208ENST00000532029 PHLDA3Q9Y5J5 127 aa15.72■□□□□ 0.11
LRRK1-208ENST00000532029 IGHV3-53P01767 116 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 MED14OSP0DP75 135 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 ZNF575Q86XF7 245 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 SYT8Q8NBV8 401 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 NDUFAF3Q9BU61 184 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 RNASE7Q9H1E1 156 aaKnown RBP15.71■□□□□ 0.11
LRRK1-208ENST00000532029 NAT8Q9UHE5 227 aa15.71■□□□□ 0.11
LRRK1-208ENST00000532029 IGHV4-4A0A075B6R2 117 aa15.7■□□□□ 0.1
LRRK1-208ENST00000532029 TCTAP57738 103 aa15.7■□□□□ 0.1
LRRK1-208ENST00000532029 OR4C5Q8NGB2 326 aa15.7■□□□□ 0.1
LRRK1-208ENST00000532029 TRAV4A0A0B4J268 109 aa15.69■□□□□ 0.1
LRRK1-208ENST00000532029 ERVFC1-1P60608 527 aa15.69■□□□□ 0.1
LRRK1-208ENST00000532029 TMEM88Q6PEY1 159 aa15.69■□□□□ 0.1
LRRK1-208ENST00000532029 FAM231DQ6ZW35 169 aa15.69■□□□□ 0.1
LRRK1-208ENST00000532029 RPP21Q9H633 154 aaKnown RBP15.69■□□□□ 0.1
LRRK1-208ENST00000532029 SCRT2Q9NQ03 307 aa15.69■□□□□ 0.1
LRRK1-208ENST00000532029 GATCO43716 136 aaKnown RBP15.68■□□□□ 0.1
LRRK1-208ENST00000532029 SFTA3P0C7M3 94 aa15.68■□□□□ 0.1
LRRK1-208ENST00000532029 HOXA5P20719 270 aa15.68■□□□□ 0.1
LRRK1-208ENST00000532029 PIK3CD-AS1Q5SR53 167 aa15.68■□□□□ 0.1
LRRK1-208ENST00000532029 ZFP82Q8N141 532 aa15.68■□□□□ 0.1
LRRK1-208ENST00000532029 GZMBP10144 247 aa15.67■□□□□ 0.1
LRRK1-208ENST00000532029 ADIRFQ15847 76 aa15.67■□□□□ 0.1
LRRK1-208ENST00000532029 ZNF479Q96JC4 524 aa15.67■□□□□ 0.1
LRRK1-208ENST00000532029 STARD9Q9P2P6 4700 aa15.67■□□□□ 0.1
LRRK1-208ENST00000532029 TRGV4A0A0C4DH28 118 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 M0R381 172 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 RS1O15537 224 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 SNAI2O43623 268 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 OR5AL1P0C617 328 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 RPL23P62829 140 aaKnown RBP15.66■□□□□ 0.1
LRRK1-208ENST00000532029 DMRTA1Q5VZB9 504 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 UQCC3Q6UW78 93 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 POM121L12Q8N7R1 296 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 FER1L6-AS1Q8NA97 138 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 TPPP3Q9BW30 176 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 SSBP4Q9BWG4 385 aaPredicted RBP15.66■□□□□ 0.1
LRRK1-208ENST00000532029 APLNQ9ULZ1 77 aa15.66■□□□□ 0.1
LRRK1-208ENST00000532029 A8MWV9 139 aa15.65■□□□□ 0.1
LRRK1-208ENST00000532029 SLAQ13239 276 aa15.65■□□□□ 0.1
LRRK1-208ENST00000532029 COMMD7Q86VX2 200 aa15.65■□□□□ 0.1
LRRK1-208ENST00000532029 C15orf54Q8N8G6 183 aa15.65■□□□□ 0.1
LRRK1-208ENST00000532029 TRAV26-1A0A087WT03 109 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 FHL2Q14192 279 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 SPANXN1Q5VSR9 72 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 CFAP126Q5VTH2 177 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 OR10AG1Q8NH19 301 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 ISOC2Q96AB3 205 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 OSTCQ9NRP0 149 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 CSMD3Q7Z407 3707 aa15.64■□□□□ 0.09
LRRK1-208ENST00000532029 A0A0J9YY99 117 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 A0A1W2PPQ1 181 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 CIDEAO60543 219 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 IGLC6P0CF74 106 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 C15orf53Q8NAA6 179 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 PRO0255Q9UI72 69 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 MUC4Q99102 2169 aa15.63■□□□□ 0.09
LRRK1-208ENST00000532029 MUC21A0A0G2JKD1 596 aa15.62■□□□□ 0.09
LRRK1-208ENST00000532029 MUC21A0A140T8X8 626 aa15.62■□□□□ 0.09
LRRK1-208ENST00000532029 LINC00862A6NCI5 91 aa15.62■□□□□ 0.09
LRRK1-208ENST00000532029 HHLA3Q9XRX5 114 aa15.62■□□□□ 0.09
LRRK1-208ENST00000532029 RYR3Q15413 4870 aa15.62■□□□□ 0.09
LRRK1-208ENST00000532029 A8MWL6 223 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 F2Z2F3 143 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 NXPH4O95158 308 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 SSTP61278 116 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 CT83Q5H943 113 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 SFRP2Q96HF1 295 aa15.61■□□□□ 0.09
LRRK1-208ENST00000532029 DYNC2H1Q8NCM8 4307 aaKnown RBP15.6■□□□□ 0.09
LRRK1-208ENST00000532029 IGHV3-73A0A0B4J1V6 119 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 H3BNG1 76 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 PAX4O43316 350 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 NUDT3O95989 172 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 CACNG7P62955 275 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 JPT2Q9H910 190 aa15.6■□□□□ 0.09
LRRK1-208ENST00000532029 CRYBA4P53673 196 aa15.59■□□□□ 0.09
LRRK1-208ENST00000532029 LYZL1Q6UWQ5 148 aa15.59■□□□□ 0.09
LRRK1-208ENST00000532029 ZFP2Q6ZN57 461 aa15.59■□□□□ 0.09
LRRK1-208ENST00000532029 OR10G8Q8NGN5 311 aa15.59■□□□□ 0.09
LRRK1-208ENST00000532029 RHODO00212 210 aa15.58■□□□□ 0.08
LRRK1-208ENST00000532029 VSIG2Q96IQ7 327 aa15.58■□□□□ 0.08
LRRK1-208ENST00000532029 TMEM218A2RU14 115 aa15.57■□□□□ 0.08
LRRK1-208ENST00000532029 GATA1P15976 413 aaPredicted RBP15.57■□□□□ 0.08
LRRK1-208ENST00000532029 CTRLP40313 264 aa15.57■□□□□ 0.08
LRRK1-208ENST00000532029 PNRC1Q12796 327 aaPredicted RBP15.57■□□□□ 0.08
LRRK1-208ENST00000532029 FAM74A4Q5TZK3 123 aa15.57■□□□□ 0.08
LRRK1-208ENST00000532029 SAMD10Q9BYL1 202 aa15.57■□□□□ 0.08
LRRK1-208ENST00000532029 A0A087WWL8 130 aa15.56■□□□□ 0.08
LRRK1-208ENST00000532029 TSKUQ8WUA8 353 aa15.56■□□□□ 0.08
LRRK1-208ENST00000532029 AP1S3Q96PC3 154 aa15.56■□□□□ 0.08
LRRK1-208ENST00000532029 V9GYV3 84 aa15.56■□□□□ 0.08
LRRK1-208ENST00000532029 PLECQ15149 4684 aaKnown RBP15.55■□□□□ 0.08
LRRK1-208ENST00000532029 F8W036 122 aa15.55■□□□□ 0.08
LRRK1-208ENST00000532029 WDR73Q6P4I2 378 aa15.55■□□□□ 0.08
LRRK1-208ENST00000532029 GTSF1Q8WW33 167 aa15.55■□□□□ 0.08
LRRK1-208ENST00000532029 GFRA4Q9GZZ7 299 aa15.55■□□□□ 0.08
LRRK1-208ENST00000532029 ICOSQ9Y6W8 199 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms