RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 LINC00315P59091 139 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 GTF2H5Q6ZYL4 71 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 SCGB3A1Q96QR1 104 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 DOPEY1Q5JWR5 2465 aa12.62□□□□□ -0.39
VPS26B-206ENST00000531741 GAGE10A6NGK3 116 aa12.62□□□□□ -0.39
VPS26B-206ENST00000531741 TMEM95Q3KNT9 176 aa12.62□□□□□ -0.39
VPS26B-206ENST00000531741 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
VPS26B-206ENST00000531741 NEXN-AS1Q8NBZ9 246 aa12.62□□□□□ -0.39
VPS26B-206ENST00000531741 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS26B-206ENST00000531741 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 SPRY2O43597 315 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 MGPP08493 103 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 TM2D2Q9BX73 214 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 TTTY13Q9BZ97 58 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 SRD5A1P18405 259 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 EDN2P20800 178 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 TAL2Q16559 108 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 JMJD8Q96S16 334 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 CST9LQ9H4G1 147 aa12.61□□□□□ -0.39
VPS26B-206ENST00000531741 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 H3BUT2 72 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 CDKN1BP46527 198 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 ZFHX3Q15911 3703 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 K7EP34 96 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
VPS26B-206ENST00000531741 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
VPS26B-206ENST00000531741 MUC4Q99102 2169 aa12.59□□□□□ -0.39
VPS26B-206ENST00000531741 LINC01619G3V211 115 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 LGALS9O00182 355 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 GCSHP23434 173 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 FXYD2P54710 66 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.39
VPS26B-206ENST00000531741 CEND1Q8N111 149 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 CSTL1Q9H114 145 aa12.58□□□□□ -0.39
VPS26B-206ENST00000531741 A0A0J9YX75 114 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 A0A1W2PPM0 123 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 K7EQG2 157 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 BAALCQ8WXS3 180 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 CACNA1AO00555 2505 aa12.58□□□□□ -0.4
VPS26B-206ENST00000531741 NRGNQ92686 78 aa12.57□□□□□ -0.4
VPS26B-206ENST00000531741 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
VPS26B-206ENST00000531741 ELANEP08246 267 aa12.57□□□□□ -0.4
VPS26B-206ENST00000531741 POLR2KP53803 58 aaKnown RBP12.57□□□□□ -0.4
VPS26B-206ENST00000531741 OCIAD2Q56VL3 154 aa12.57□□□□□ -0.4
VPS26B-206ENST00000531741 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 FSHBP01225 129 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 LGALS1P09382 135 aaKnown RBP12.56□□□□□ -0.4
VPS26B-206ENST00000531741 CD7P09564 240 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
VPS26B-206ENST00000531741 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
VPS26B-206ENST00000531741 RAB37Q96AX2 223 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 OR11H12B2RN74 326 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 OR11H2Q8NH07 326 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
VPS26B-206ENST00000531741 VPS13CQ709C8 3753 aa12.54□□□□□ -0.4
VPS26B-206ENST00000531741 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
VPS26B-206ENST00000531741 VCYO14598 125 aa12.54□□□□□ -0.4
VPS26B-206ENST00000531741 TGFAP01135 160 aa12.54□□□□□ -0.4
VPS26B-206ENST00000531741 E9PLD3 99 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 FABP2P12104 132 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 Q6YL49 198 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 SPG11Q96JI7 2443 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 COL12A1Q99715 3063 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 MYMXA0A1B0GTQ4 84 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
VPS26B-206ENST00000531741 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
VPS26B-206ENST00000531741 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 IGIPA6NJ69 53 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 NAA38Q9BRA0 125 aaKnown RBP12.52□□□□□ -0.4
VPS26B-206ENST00000531741 JPT2Q9H910 190 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 ZNF702PQ9H963 129 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 SPCS1Q9Y6A9 102 aa12.52□□□□□ -0.4
VPS26B-206ENST00000531741 RIPPLY3P57055 190 aa12.52□□□□□ -0.41
VPS26B-206ENST00000531741 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
VPS26B-206ENST00000531741 PAPPA-AS1Q5QFB9 102 aa12.52□□□□□ -0.41
VPS26B-206ENST00000531741 TMEM141Q96I45 108 aa12.52□□□□□ -0.41
VPS26B-206ENST00000531741 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
VPS26B-206ENST00000531741 K7ERU9 68 aa12.51□□□□□ -0.41
VPS26B-206ENST00000531741 WFDC12Q8WWY7 111 aa12.51□□□□□ -0.41
VPS26B-206ENST00000531741 TIMM17AQ99595 171 aa12.51□□□□□ -0.41
VPS26B-206ENST00000531741 CSPG4Q6UVK1 2322 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms