RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF506Q5JVG8 444 aa8.93□□□□□ -0.98
AMBRA1-210ENST00000531542 SGK494Q96LW2 274 aa8.93□□□□□ -0.98
AMBRA1-210ENST00000531542 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
AMBRA1-210ENST00000531542 BATF3Q9NR55 127 aa8.93□□□□□ -0.98
AMBRA1-210ENST00000531542 PGPEP1LA6NFU8 196 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 A8MWV9 139 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 PSCAO43653 123 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 PRNTQ86SH4 94 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 FRZBQ92765 325 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 NKX6-2Q9C056 277 aaPredicted RBP8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 MED28Q9H204 178 aa8.92□□□□□ -0.98
AMBRA1-210ENST00000531542 FABP5P3A8MUU1 101 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 C1QBP02746 253 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 INAFM2P0DMQ5 153 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 OR10J3Q5JRS4 329 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 COX8CQ7Z4L0 72 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
AMBRA1-210ENST00000531542 FAT1Q14517 4588 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 GIPP09681 153 aaPredicted RBP8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 Q5VSD8 79 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 Q8N814 137 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 INO80EQ8NBZ0 244 aaPredicted RBP8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 PARLQ9H300 379 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 IL36BQ9NZH7 164 aa8.9□□□□□ -0.98
AMBRA1-210ENST00000531542 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 BORCS7-ASMTA0A0B4J1R7 106 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 CTXND1A0A1B0GTU2 59 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 RNF222A6NCQ9 220 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 Q5BKY6 102 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 UFSP1Q6NVU6 142 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 ARL2-SNX15V9GYD0 113 aa8.89□□□□□ -0.99
AMBRA1-210ENST00000531542 HERC1Q15751 4861 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 SRRM2Q9UQ35 2752 aaKnown RBP8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 A0A087WWC5 75 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 TRAV8-3A0A0A6YYJ7 113 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 IGHV3-73A0A0B4J1V6 119 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 ASIPP42127 132 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 ZNF726P1Q15940 193 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 RPL7L1Q6DKI1 246 aaKnown RBP8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 Q6ZSN1 163 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 ZFP30Q9Y2G7 519 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
AMBRA1-210ENST00000531542 FAM229AH3BQW9 127 aa8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 PEX7O00628 323 aa8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 IFNA7P01567 189 aa8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 S100A4P26447 101 aaKnown RBP8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 TOR2AQ5JU69 321 aa8.87□□□□□ -0.99
AMBRA1-210ENST00000531542 TRAV34A0A0B4J273 112 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 TRBV6-1A0A0K0K1D8 114 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 FAM74A7A6NL05 159 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 RHODO00212 210 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 Q86TA4 180 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 Q9HAA7 133 aa8.86□□□□□ -0.99
AMBRA1-210ENST00000531542 B4DEV8 164 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 KRBOX1C9JBD0 128 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 FHITP49789 147 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 CRIP1P50238 77 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 LGALSLQ3ZCW2 172 aaPredicted RBP8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 COX11Q9Y6N1 276 aa8.85□□□□□ -0.99
AMBRA1-210ENST00000531542 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 AKR1C8PQ5T2L2 129 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 Q6ZSA8 131 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 ZC2HC1AQ96GY0 325 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 SFRP2Q96HF1 295 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
AMBRA1-210ENST00000531542 FXYD6-FXYD2A0A087WZ82 144 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 GAGE12JA6NER3 117 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 SMR3BP02814 79 aaPredicted RBP8.83□□□□□ -1
AMBRA1-210ENST00000531542 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 UBE2G2P60604 165 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 GAGE1Q13065 139 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 GAGE4Q13068 117 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 GAGE5Q13069 117 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 ZNF674Q2M3X9 581 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 GAGE13Q4V321 117 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 OR11H4Q8NGC9 324 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 OR2T35Q8NGX2 323 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 SAMD10Q9BYL1 202 aa8.83□□□□□ -1
AMBRA1-210ENST00000531542 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 G3V3Q6 166 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 H3BVH4 76 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 SH2D1AO60880 128 aa8.82□□□□□ -1
AMBRA1-210ENST00000531542 LTAP01374 205 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms